PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678365917 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bZIP | ||||||||
Protein Properties | Length: 283aa MW: 30496.1 Da PI: 9.5227 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 58.8 | 1.1e-18 | 145 | 207 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e krerrkq+NRe+ArrsR+RK+ae eeL++kv +L+ N +Lk e+++l + +aklk ++ 678365917 145 EREMKRERRKQSNRESARRSRLRKQAEAEELANKVHALTCDNLTLKAEMKKLMESSAKLKLQN 207 799*********************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-14 | 138 | 207 | No hit | No description |
SMART | SM00338 | 8.6E-16 | 145 | 209 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-17 | 145 | 207 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.047 | 147 | 210 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.68E-10 | 148 | 204 | No hit | No description |
CDD | cd14702 | 1.10E-14 | 150 | 198 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 152 | 167 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MGSSTEEGKN VKGEKPSPPP MACTSPTMES SAKTDGGFIT KLIALHGNFD INDPGSSDSE 60 PNGGSVDGNN GTLGGRANEA RMKRSRRGSP KNNVDALNSR LAPPPSDKAA AVDVAPLSDA 120 LVAKTEINPI ELNVSQQVPS WTQNEREMKR ERRKQSNRES ARRSRLRKQA EAEELANKVH 180 ALTCDNLTLK AEMKKLMESS AKLKLQNAAL MERLHGSPHP GLTDSNQRAK PVATMNLLAR 240 VNNSDDRDTD DEKGAVVYES RSPAKLHQLL DGNSLRGDAV AAT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 167 | RRSRLRK |
2 | 161 | 168 | RRSRLRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678365917 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093363.1 | 2e-55 | common plant regulatory factor 1 isoform X5 | ||||
Refseq | XP_020551517.1 | 2e-55 | common plant regulatory factor 1 isoform X4 | ||||
TrEMBL | A0A2G9I9X4 | 4e-54 | A0A2G9I9X4_9LAMI; Uncharacterized protein | ||||
STRING | Migut.B01828.1.p | 6e-49 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3113 | 24 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 6e-36 | G-box binding factor 3 |