PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678362431
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 583aa    MW: 65568 Da    PI: 9.1009
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678362431genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.3e-09454501448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E ++l+d+v+++G g+W++I + +     +Rt  ++k++w+++l
        678362431 454 WTITEVKQLIDGVTEFGVGRWSRIKKLFFsssAHRTSVDLKDKWRNLL 501
                      9*********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.29446505IPR017930Myb domain
SuperFamilySSF466899.33E-15448505IPR009057Homeodomain-like
SMARTSM007173.1E-7450503IPR001005SANT/Myb domain
PfamPF002493.0E-6454501IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-11454502IPR009057Homeodomain-like
CDDcd116609.39E-19454502No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    Send to blast
MPMLLIHQAM ENRPSTVGAE DGKTDARCQH TEHRDRHASE DNGLSFSENI PRNDIDMDGL  60
SCNFDSSTTG PGQEMEDMLN PDVLHEDIGY LRLQNDFCSI GNGYLLGDEF AENMGLQSSV  120
TGNLELTSFS CMNTTWKADI FRTSEVPECP SHELNMGGCG YGEISLLGPS AEEKLSRSTS  180
SCTLEDVGKF QSISSCSFHD IVSDEADMSA SPSKDVVNSR KRDVNDEFFS AGKNAETDGR  240
DYETLGRHSH ACGTHEHPTP KRSRKPTQRY VDELADPVLR QSRKKRVVSS LTPKDRSPEA  300
KSRKKCSSGA KPTKLPAEEF SVKAIQVPFG SLVHTECPES PKTPAYEPPR LPERGYPVIK  360
LKENTVTTRT QRRRNEGTLA IHLKKDQNAI IMRQKKINDD VVPSHLKKKG HYVKVQNRSK  420
RNNHAAVIPI KREKCLAAES PEEGGGRRKH HILWTITEVK QLIDGVTEFG VGRWSRIKKL  480
FFSSSAHRTS VDLKDKWRNL LKASGLVEKE NHKGGERRSL AWRPLPKAII RRVCELAAMH  540
PYPKGQKQRT PMIKYIHHRA SPDRSTDITL NDYRRILRSI DGN
Cis-element ? help Back to Top
SourceLink
PlantRegMap678362431
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094643.11e-178uncharacterized protein LOC105174291 isoform X1
TrEMBLA0A0K1SB990.0A0A0K1SB99_REHGL; Telomere repeat-binding factor like-protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91551723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.11e-28TRF-like 6