PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678345248
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 338aa    MW: 36517.2 Da    PI: 11.2655
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678345248genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP110.13.3e-341083033115
        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.............. 88 
                +kk + +++  kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i++ tgt++++as+++ +ss   +s++s++              
  678345248 108 VKKLSAKDRNNKVDGRGRRVRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIATTGTGTTPASFSNVSSSGTRSSSPSISvsldhkpishsllt 207
                799*****************************************************************88844444444444444466777777788888 PP

        TCP  89 .......................................................................kaaksaakskksqksaasalnlakesr 115
                                                                                       ++++s+++++++++s++  l ++++++
  678345248 208 pspapfilgkrirphdagihhrergfeesasttaatnsavatggfwalparpdfgqvwsftphpeilvaasRNSPSSHHHQQQTHSSS--LRFSQQHQ 303
                8888888888888888888888888888888888888888888888888888888888888888888865544444444444555444..66666444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.4E-29112275IPR005333Transcription factor, TCP
PROSITE profilePS5136924.26113167IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MRLVPGSGRR INAKTYGWMD VDINWGAVEL GGHVPSCSLH TPEHRLRGFC LSVNHFRCLR  60
SALPFWIAFW SLTRVGMLTS NSDGSNGGAG PVLPTTSAAA VTSTVQKVKK LSAKDRNNKV  120
DGRGRRVRMP IVCAARVFQL TRELGHKSDG QTIEWLLRQA EPSIIATTGT GTTPASFSNV  180
SSSGTRSSSP SISVSLDHKP ISHSLLTPSP APFILGKRIR PHDAGIHHRE RGFEESASTT  240
AATNSAVATG GFWALPARPD FGQVWSFTPH PEILVAASRN SPSSHHHQQQ THSSSLRFSQ  300
QHQHLSEASA ARVGNYLPIP QVNGHHLDLL ASLSGIPR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678345248
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022868503.12e-94transcription factor TCP7-like
RefseqXP_022868504.12e-94transcription factor TCP7-like
SwissprotQ9FMX22e-66TCP7_ARATH; Transcription factor TCP7
TrEMBLA0A4D8ZI281e-92A0A4D8ZI28_SALSN; Transcription factor TCP21 (Protein CCA1 HIKING EXPEDITION)
STRINGXP_010249637.15e-75(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39512242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.11e-46TCP family protein