PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678344629 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bZIP | ||||||||
Protein Properties | Length: 357aa MW: 39968.6 Da PI: 7.1299 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.8 | 2.3e-08 | 241 | 287 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L ae ++ e+e l+++ l +e+ 678344629 241 AQRSRVRKLQYIAELERNVQALHAEGSEVSAEIEFLNQQNLILSMEN 287 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-7 | 230 | 289 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.02E-14 | 232 | 280 | No hit | No description |
SuperFamily | SSF57959 | 5.94E-6 | 240 | 283 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-8 | 241 | 283 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MENSKGPSTV KSMVYKGKGS LLPPKIPFSG VPSSFSDYIP VSAICRGAPR KPVEGNLHQR 60 TSSESILTEE TPSWLNDLLD EPDTPVRRGH RRSSSDSLPY FDTSAAEKMK HTSQDDSKSR 120 DISEVSIWGS KVLGIGGHTN HSLFSADTNH FAKIKNRPWD AAQSSMSPQL ASPRETAIMP 180 TSETVSIPQD ADAYQFALVE NQNHVESGDR DSDASFQQTE SSHVKSAVPE PDTRRAKQQY 240 AQRSRVRKLQ YIAELERNVQ ALHAEGSEVS AEIEFLNQQN LILSMENKAL KQRLESLSQE 300 QLIKCLEHDM LEREAARLRT LYQTLLLLPQ QPPSGHRRTP SRDLDQQLAK LSLKQKE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678344629 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011092330.1 | 1e-132 | uncharacterized protein At4g06598 | ||||
Refseq | XP_011092333.1 | 1e-132 | uncharacterized protein At4g06598 | ||||
TrEMBL | A0A2G9GBP7 | 1e-123 | A0A2G9GBP7_9LAMI; Uncharacterized protein | ||||
STRING | cassava4.1_026621m | 1e-120 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2765 | 17 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 5e-79 | bZIP family protein |