PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678344382
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family CAMTA
Protein Properties Length: 1047aa    MW: 116671 Da    PI: 5.9084
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678344382genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.53.4e-55511662117
       CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101
                ++ ++rwl++ ei++iL n++k+++++e++++p sgs++L++rk +ryfrkDG++w+kk+dgktv+E+hekLKvg+v++l+cyYah+e+n++fqrr+ywl
  678344382  51 YEAQSRWLRPAEICEILRNYQKFNISAEAPSKPISGSVFLFDRKALRYFRKDGHNWRKKRDGKTVKEAHEKLKVGSVDMLHCYYAHGEDNENFQRRSYWL 150
                56699*********************************************************************************************** PP

       CG-1 102 Leeelekivlvhylev 117
                Le +l +iv+vhyle 
  678344382 151 LEPDLMHIVFVHYLEI 166
                *************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143778.95746172IPR005559CG-1 DNA-binding domain
SMARTSM010762.3E-7850167IPR005559CG-1 DNA-binding domain
PfamPF038591.1E-4952165IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.105.4E-6464553IPR013783Immunoglobulin-like fold
PfamPF018335.7E-5466551IPR002909IPT domain
SuperFamilySSF812961.54E-14466552IPR014756Immunoglobulin E-set
PROSITE profilePS5029717.582648755IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.33E-18652756IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.0E-17654757IPR020683Ankyrin repeat-containing domain
PfamPF127965.1E-8656720IPR020683Ankyrin repeat-containing domain
CDDcd002043.04E-14659753No hitNo description
SMARTSM002481700661690IPR002110Ankyrin repeat
PROSITE profilePS500888.549661693IPR002110Ankyrin repeat
SMARTSM002480.0028694723IPR002110Ankyrin repeat
PROSITE profilePS500889.698694726IPR002110Ankyrin repeat
SMARTSM002484100733762IPR002110Ankyrin repeat
SuperFamilySSF525401.38E-6861908IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.036864886IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.84865894IPR000048IQ motif, EF-hand binding site
PfamPF006120.0023867885IPR000048IQ motif, EF-hand binding site
SMARTSM000158.4E-4887909IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.102888913IPR000048IQ motif, EF-hand binding site
PfamPF006124.0E-5889908IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1047 aa     Download sequence    Send to blast
MDESGSVFEL GTVSTWFSVV GFVYWGGGGC CCDVLLCLSC LEILDIQRTL YEAQSRWLRP  60
AEICEILRNY QKFNISAEAP SKPISGSVFL FDRKALRYFR KDGHNWRKKR DGKTVKEAHE  120
KLKVGSVDML HCYYAHGEDN ENFQRRSYWL LEPDLMHIVF VHYLEIKGHK ANISGGFGDA  180
GVALNPGRDS SLSSGFRGTS PSSPLSSAYA DAESENYHQA TSELHSYSEP SVQDDGHYAH  240
PSSYSSPLPA GVYIFRTQAV YGTSSVPFPL DDENGDFGGG IYSSAAATPI DAAYWPEIGR  300
NPVAGKVIYR QESASTVPSS HVNRVGLNQT FSDVSFPPDQ LNDMRLFHEY HDEKNGNLPL  360
LTSNQGIGIT SILNFESGMG SESYTFPMKK PMLGSLHSEE ALKKVDSFTR WMAKELGDAD  420
ELAVQPSGGI SWSMMGSDYE SNIPVQLQNG VDTMSPSISQ DQLFSITFFS PHWTYSDCET  480
KVLITGMFLK NEADLSESRF SIMFGQVEVP AEVLADGILC CAAPYSSPGS VPLYVTCSNR  540
LACSEIREFE YRARVGPMSS PIEVGSVAVM HLYQRFETIL GLEPHGSPQS CTGNDAQEQI  600
MNLRIISQEE ENSLEKRITS EDDVFLLGDL LIEKKLKDRF FAWILLRVAE DGKGLTLLDK  660
FGQSALHLAA ALGFIWAFEP FIIAGVKIDF RDKYGWTALH WAAFYGREEA VAVLVSLGAA  720
PGVLTHPSSE YPLSRTPADL ASANGHKGIS GFLAEISLTT HLSTLKVNDE GTTSISDVKA  780
VETLSDRVAS RTKEDDVPDK LSLKDSLAAV CNATQAAARI HQFFRIQSFQ RKQFLERESI  840
ELLDADKQAV RSGRTSRLGQ SFGKANAAAT HIQKKYRGWK KRKEFLLLRQ KAVKIQAHFR  900
GHQARKKHNI IWSVGIMEKA ILRWRRKASG LRGFRNEVPT ESTMEGSSTT LPSEEVYEVL  960
KEGRRQTEVR MQKALDRVKS MAQYPEARAQ YRRLLTVAEG FREAKDASDA MILEALEDMN  1020
YPDYPDDDLF DIASLLEDEA FMSLTYQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678344382
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092424.10.0calmodulin-binding transcription activator 2
TrEMBLA0A2G9H0E60.0A0A2G9H0E6_9LAMI; Uncharacterized protein
STRINGMigut.B00609.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains