PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678344247 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21295.8 Da PI: 7.3489 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.9 | 3.4e-10 | 31 | 61 | 26 | 55 |
AP2 26 g.krkrfslgkfgtaeeAakaaiaarkkleg 55 +++r++lg+f+tae Aa+a+++a+ + g 678344247 31 ScRKRRVWLGTFDTAEAAARAYDEAAILMSG 61 2345*********************987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 14.328 | 8 | 69 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.2E-13 | 20 | 75 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.0E-7 | 30 | 59 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.9E-12 | 31 | 70 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-18 | 31 | 69 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MSNLDRRSLL GLEKEDQAPG AVTWRLGFEQ SCRKRRVWLG TFDTAEAAAR AYDEAAILMS 60 GRNAKTNFPA PPEYQYSSAN TNSLSSVLSA KLRKCSKSPS LTCLRLDTEN SHIGVWQKRA 120 GSRSDSENSK WVMTVHLGSN SSSTTNSGFD NNGVLPPPPE PPRGVDPIQM IAGAGIEEDE 180 RIALQMIEEL LNRN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678344247 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017648662.1 | 3e-59 | PREDICTED: ethylene-responsive transcription factor WIN1 isoform X2 | ||||
Swissprot | Q9XI33 | 3e-47 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | S8CLD5 | 4e-59 | S8CLD5_9LAMI; Uncharacterized protein | ||||
STRING | Lus10030097 | 1e-56 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1352 | 24 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 5e-34 | ERF family protein |