PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678342797
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 238aa    MW: 25469.4 Da    PI: 9.8091
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678342797genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.52.4e-3817122289
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssas.nsssg.......... 88 
                + kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++  +++s s +++ + +s+          
  678342797  17 TNKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFStvSPASTSDNNKpHFHSPapfllgkrlr 116
                5799**************************************************************9997775533333333331222224555555444 PP

        TCP  89 .....k 89 
                     +
  678342797 117 pedheD 122
                322220 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136927.8922377IPR017887Transcription factor TCP subgroup
PfamPF036341.3E-3223117IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MSTSPSDGPH GGAGPTTNKK PPAKDRHSKV DGRGRRIRMP IICAARVFQL TRELGHKSDG  60
QTIEWLLRQA EPSIIAATGT GTTPATFSTV SPASTSDNNK PHFHSPAPFL LGKRLRPEDH  120
EDAELSKDDV NAPASSSPAP GPAAGFWALP ARADFGQVWS FAPHPEMVFN NSPHLTHPSS  180
LRFLQQQQQQ QPLALNEASA ARVGNYIPIA QVPGHHLNLL ASLSGGAPQS SEQRRTAD
Cis-element ? help Back to Top
SourceLink
PlantRegMap678342797
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022868503.11e-99transcription factor TCP7-like
RefseqXP_022868504.11e-99transcription factor TCP7-like
SwissprotQ9FMX21e-74TCP7_ARATH; Transcription factor TCP7
TrEMBLA0A4D8XZT11e-96A0A4D8XZT1_SALSN; Transcription factor TCP21 (Protein CCA1 HIKING EXPEDITION)
TrEMBLA0A4D8YY131e-96A0A4D8YY13_SALSN; Transcription factor TCP21 (Protein CCA1 HIKING EXPEDITION)
STRINGSolyc04g009180.1.16e-81(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39512242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.16e-59TCP family protein