PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678340145
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 289aa    MW: 32313.9 Da    PI: 4.4928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678340145genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.2e-1776127155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                s+y+GV +++ +grW+A+I  ++    +k+ +lg++ t+eeAa+a++ a+ +++g
  678340145  76 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYNTEEEAAAAYDMAAIQFRG 127
                89****99***********99644...4***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.2E-4147IPR001471AP2/ERF domain
PROSITE profilePS5103211.799141IPR001471AP2/ERF domain
SuperFamilySSF541716.28E-9742IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.2E-10742IPR001471AP2/ERF domain
CDDcd000181.57E-11942No hitNo description
SuperFamilySSF541714.64E-1876136IPR016177DNA-binding domain
CDDcd000181.49E-1376137No hitNo description
PfamPF008475.3E-1276127IPR001471AP2/ERF domain
SMARTSM003802.0E-2677141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.2E-1977135IPR001471AP2/ERF domain
PROSITE profilePS5103218.38677135IPR001471AP2/ERF domain
PRINTSPR003675.2E-57889IPR001471AP2/ERF domain
PRINTSPR003675.2E-5117137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MWVLLTTEVY LGAYDVEEEA ARTYDLAALR YWGTTATLNF PEETYAKEVE EMGKFTREEY  60
LASLRRNSSG FSRGISKYRG VARHHHNGRW EARIGRVCGN KYLYLGTYNT EEEAAAAYDM  120
AAIQFRGANA VTNFDINKYV GKPKKAEDTA VAQVKQRADK PPLSAEELHD HLQKDVQRCH  180
LPELRPVEFI VSEGMADGHD NPWDLCLDIA FDAPSLPDVV VMEEASQFFD YRGFEDDIEC  240
IFDEPLGALP DAISGIGDHQ LKNLVAADQG DSSSSSPYSS TSICSSNML
Cis-element ? help Back to Top
SourceLink
PlantRegMap678340145
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078716.15e-98ethylene-responsive transcription factor WRI1
TrEMBLA0A4D9AZF22e-89A0A4D9AZF2_SALSN; AP2-like factor, ANT lineage
STRINGMigut.B01163.1.p4e-86(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91342227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.33e-65AP2 family protein