PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678339591
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 362aa    MW: 40109.4 Da    PI: 4.6588
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678339591genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-1786134254
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 
                +y+GVr +k +g+W+AeIrdp        kr++lg++ t+e+A +a++a r+++e
  678339591  86 KYRGVRHRK-SGKWAAEIRDP-----IgrKRVWLGTYSTPEGASRAYEAKRLEFE 134
                8****9666.8*********8.....335**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-1986133IPR001471AP2/ERF domain
PfamPF008471.2E-1086134IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-1586133IPR016177DNA-binding domain
CDDcd000189.06E-2186133No hitNo description
PROSITE profilePS5103218.0786148IPR001471AP2/ERF domain
SMARTSM003801.5E-1686145IPR001471AP2/ERF domain
PRINTSPR003674.9E-78798IPR001471AP2/ERF domain
PRINTSPR003674.9E-7109125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MKRVRVICSD PYATDSSDDE EPDRRRKKKF AVVYEASLAP SPSPPLRLDC DTSVQDSNCG  60
ENSNKGGVLK KKSLEPNGDH GFVSGKYRGV RHRKSGKWAA EIRDPIGRKR VWLGTYSTPE  120
GASRAYEAKR LEFERLLFSK QAASHSSPEK NPKKMKHRTY DETAATSDAS NHSVETQVSR  180
TTCPSTVVEL ESPISGSKRT AAIRVEKEAA YPAGFSLIRE GTDLGTELHC SSDMCSRFSL  240
GNIFDDVPCD LEEGAPPLPD SRAPDCIPMV DDHHLPPADW EDILTIESDL PSHPLVDPAT  300
SDYNYVDDSN LPNAFPGLDD IIRDYELGYF NLADDDWNPN ALPDFDNLDL GGDEWMNNMV  360
PA
Cis-element ? help Back to Top
SourceLink
PlantRegMap678339591
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-17ERF family protein