PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678331955
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB
Protein Properties Length: 288aa    MW: 31594 Da    PI: 8.6888
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678331955genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.39.8e-201156147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ll ++v+++G ++W+ I+++++ gR++k+c++rw + 
        678331955 11 KGPWSPEEDDLLRRLVEKHGARCWSVISKCIP-GRSGKSCRLRWCNQ 56
                     79******************************.***********985 PP
2Myb_DNA-binding54.13.5e-1765107347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T eEde +++a++++G++ W+tIar +  gRt++ +k++w++ 
        678331955  65 AFTREEDEAIIRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 107
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129425.404661IPR017930Myb domain
SuperFamilySSF466898.99E-318104IPR009057Homeodomain-like
SMARTSM007174.3E-181059IPR001005SANT/Myb domain
PfamPF002492.0E-191156IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.0E-261264IPR009057Homeodomain-like
CDDcd001671.23E-171355No hitNo description
SMARTSM007175.7E-1562110IPR001005SANT/Myb domain
PROSITE profilePS5129421.7963112IPR017930Myb domain
PfamPF002493.9E-1465107IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.2E-2365111IPR009057Homeodomain-like
CDDcd001671.15E-1265108No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MAARSDYERI KGPWSPEEDD LLRRLVEKHG ARCWSVISKC IPGRSGKSCR LRWCNQLSPE  60
VEHRAFTREE DEAIIRAHAK FGNKWATIAR LLSGRTDNAI KNHWNSTLKR KCLSMSAEEF  120
KAFEPEAQLP PLKRSASVGP LTTASPSTHG VNPGSPAASD ISDSGHLVYK PLAVPAGGAQ  180
SPPPEIPDPL TSLSLSLPGT EPITDPKPTS FPAKHTSILQ SIPTQLFPPP GTPSGKQLFS  240
PEFMAVMQDM VRNEVRNYMS GIEQNGCCFE RDAIQNAVIK RMGTSKID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A3e-3981121105MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678331955
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851720.11e-128PREDICTED: transcription factor MYB44-like
SwissprotO231604e-82MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A022Q9Z01e-127A0A022Q9Z0_ERYGU; Uncharacterized protein
TrEMBLA0A059PRP01e-127A0A059PRP0_SALMI; MYB-related transcription factor
STRINGMigut.C00524.1.p1e-128(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15862471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-81myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]