PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678327870
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 435aa    MW: 47831.2 Da    PI: 6.8048
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678327870genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.1e-10230288563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+     l++e+
  678327870 230 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAEN 288
                9*********************************************9998888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.8E-16226290IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932228291IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10230281No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-10230284No hitNo description
PfamPF001701.0E-8230284IPR004827Basic-leucine zipper domain
CDDcd147031.61E-25231280No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MDKEKSHHGS NNLLPPSGRY SVFSPPGSSY GVKSEQLGQS NLPPLGPGSS SDQGHFGHGM  60
NSASNQFSHD ISQMPDNPPK KMGHRRAQSE IITLPDDISF DSDLGVVGGF EGPSFSDETD  120
EDMFSMFMDM DKLNSASATS ALHIGESSSS IAAERGSAST PIPMVGPSMD NVASGLSEKP  180
RIRHHHSQSM DGSTSIKPEM LMSGSEDTSA DTKKAISAAK LAELALIDPK RAKRIWANRQ  240
SAARSKERKM RYIAELERKV QTLQTEATSL SAQLTLLQRD TNGLTAENSE LKLRLQTMEQ  300
QVHLQDALND ALKEEIHHLK VLTCQTIGNG GNMMNLSASF GGNQQYFGNN HAMHTLLTAQ  360
QLQQLQIHPQ KKQQQQQFQP HQLHQFQQQQ QQQQLPQLSL QRQDQQLQQV GDGKLRNSIP  420
SPSQKDLAPD ASQKE
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678327870
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091638.10.0probable transcription factor PosF21
RefseqXP_011091639.10.0probable transcription factor PosF21
SwissprotQ040881e-139POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2G9GFX20.0A0A2G9GFX2_9LAMI; Uncharacterized protein
STRINGXP_008222595.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-139bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]