PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678321398
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ARR-B
Protein Properties Length: 279aa    MW: 31338.1 Da    PI: 8.2461
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678321398genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like22.13.5e-07225244523
    G2-like   5 rWtpeLHerFveaveqLG.G 23 
                +Wt+eLH++Fv a+e+LG G
  678321398 225 DWTEELHAKFVAAIEELGeG 244
                7****************844 PP
2Response_reg36.23.3e-13321371107
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vd e+  ++  + +le  +y +v+ ++ +++al++l + d  +D+++  ++ p+++ ++ll++  + +  +pi ++t  +++  a +al++Ga 
     678321398  32 VLVVDHEKEGLRHTCHMLELCRY-QVTPVEYPSSALAMLLNGDpkFDVVIANVQSPDLHSSTLLQHAVTVG--IPIALMTLDDNPVIAMKALERGAF 125
                   89*********************.9**************999999*******************9988876..************************ PP

                   EEEESS--HHHH CS
  Response_reg  96 dflsKpfdpeel 107
                    +  Kp  +e l
     678321398 126 LCMRKPATIEML 137
                   ******999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.98E-1728152IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23008.0E-1729153No hitNo description
SMARTSM004488.5E-630140IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011023.54631145IPR001789Signal transduction response regulator, receiver domain
PfamPF000727.1E-632137IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.97E-933137No hitNo description
Gene3DG3DSA:1.10.10.606.7E-5220243IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MWREGGFHVD PWAASSSLPM PYHGVVHTGI HVLVVDHEKE GLRHTCHMLE LCRYQVTPVE  60
YPSSALAMLL NGDPKFDVVI ANVQSPDLHS STLLQHAVTV GIPIALMTLD DNPVIAMKAL  120
ERGAFLCMRK PATIEMLSVL WQHVVREKAR IMRERDVLMA AKHAAAADLR FGELPSSDDG  180
SKGKGKKTVK AAGGGTRITD YEDARDLRYP HHHCNSNVKK KMCTDWTEEL HAKFVAAIEE  240
LGEGSTVAGK YSTNTFFLTY IYFIYFFSQG VFPRRSWRR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678321398
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079700.13e-68two-component response regulator ARR14-like
STRINGMigut.D00936.1.p1e-45(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-19response regulator 2