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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | 678321387 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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| Family | G2-like | ||||||||
| Protein Properties | Length: 184aa MW: 20980.2 Da PI: 9.8941 | ||||||||
| Description | G2-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | G2-like | 38.7 | 2.2e-12 | 21 | 45 | 2 | 26 |
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26
prlrWtpeLH++F++av++LGG++
678321387 21 PRLRWTPELHRCFLHAVQRLGGHDS 45
8*********************986 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.10.10.60 | 1.8E-11 | 17 | 46 | IPR009057 | Homeodomain-like |
| SuperFamily | SSF46689 | 7.53E-5 | 19 | 45 | IPR009057 | Homeodomain-like |
| TIGRFAMs | TIGR01557 | 6.2E-8 | 21 | 45 | IPR006447 | Myb domain, plants |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 184 aa Download sequence Send to blast |
MGELGRDTGV TVRQYIRSKM PRLRWTPELH RCFLHAVQRL GGHDSTLLML SFALFRQLGS 60 SIFAHFLLCV SQRVSCVVEF LNIPGRRRIA GRCWENECLI SARKRARIEK MSWMSIANAA 120 GSHCRRRIIT KGNDDCMAEK VMEDTNPKKN DFLPAEPKLE RSSRSGNDGE EEELSLSLSL 180 SLSR |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | 678321387 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G40260.1 | 2e-13 | G2-like family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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