PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678320619
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Nin-like
Protein Properties Length: 850aa    MW: 94593.4 Da    PI: 6.7112
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678320619genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK72.84.5e-23541620152
     RWP-RK   1 aekeisledlskyFslpikdAAkeLg............................vclTvLKriCRqyGIkRWPhRkiksl 52 
                aek+i+l++l+++Fs+++kdAA +Lg                            vc+T+LKriCRq+GI+RWP R ik++
  678320619 541 AEKTITLQELKQHFSGTLKDAATHLGgthchvsdnitavnlsclfayfsmlliaVCPTTLKRICRQHGIRRWPCRTIKKV 620
                589***************************************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.855531640IPR003035RWP-RK domain
PfamPF020423.5E-21544620IPR003035RWP-RK domain
Gene3DG3DSA:3.10.20.2408.9E-22754835No hitNo description
SuperFamilySSF542773.64E-22754839No hitNo description
SMARTSM006662.0E-21755838IPR000270PB1 domain
PROSITE profilePS5174524.746755838IPR000270PB1 domain
CDDcd064074.82E-38756837No hitNo description
PfamPF005641.3E-17757834IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    Send to blast
MDKGSPGNLL DLDIIDDLIL DGCWLEANGL EFPYFSSPNF VSTLEQQLDT DATIADFSMT  60
PSKGFQNENQ TSSSPENKQL AGGSKSITND NSVGMFAEHE DSLESAEPSK RWWIGPRPST  120
PVMERLIQAL GCLQKCLADR DALIQIWAPV NREGKRVLTT DDQPYSLDFN CASLAHYREV  180
SVSYQFSTDE DYKGIVGLPG RVFRSKVPEW TPDVRFFTWD EYPRIDHALK YDVRGTLLVP  240
VLEQGNKACL GVIEVVLTKQ KIQYRPELLT VCKALEAVNL RTAELSRFEN GKTTSDLSYQ  300
AALPEIYDVL GSVCTSHKLP LAQTWVSCIL QGKEGCRHSD ENVNNCVSPV DSACYIFDPL  360
IQGFHEACSE YHLLKGLGVV GKAFETNQPC YSSDVTSCSI TEYPLSHYAR IFGLKAAVAI  420
RLRSTSTGLA DFVLEFFLPV KCGEAEEQRK LLSSLSTTMQ NACRTLRVVT DEELQQEAGI  480
ANNASTSAFK CIGSSRDPSL KPALMHHEDC GLVTPNIMTF TSAPDGLLST SRAREKRRSK  540
AEKTITLQEL KQHFSGTLKD AATHLGGTHC HVSDNITAVN LSCLFAYFSM LLIAVCPTTL  600
KRICRQHGIR RWPCRTIKKV GHSLQKIQRV IDSVQGASSL VKMEPVYSNF SKLASPCKPG  660
TASLDEKVDI NTSRHAAAFP SPSTSRSYSS SSRRSCSIEV HPARAHSSSP VSHKDNQEEP  720
STSKENLHMI KDGPKLIPSS LHKPESLIPA AEKAGLRMKV SYRTDTIRLR VQNHWKYLDL  780
LQEVSKRFKV EDATDFHLKY LDDDGEWILL TCDADLEECI DLCRLSPRQT IKLLFHEICH  840
VNSASIEHQP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678320619
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074088.10.0protein NLP5-like
RefseqXP_011074089.10.0protein NLP5-like
RefseqXP_020548089.10.0protein NLP5-like
RefseqXP_020548090.10.0protein NLP5-like
TrEMBLA0A2G9FXJ20.0A0A2G9FXJ2_9LAMI; Uncharacterized protein
STRINGMigut.N02963.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.10.0Nin-like family protein