PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678318602
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 214aa    MW: 23148.9 Da    PI: 4.7872
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678318602genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.12.5e-142373155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               sgy+G r +  +g+Wv+eIr p++   ++r++lg++ t+e+Aa+a++  +++++g
  678318602 23 SGYRGARMRV-WGKWVSEIRLPKK---KTRVWLGTYPTEEMAARAHDVGALAFKG 73
               79*****999.**********854...6*******************99888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-82369IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-192382IPR016177DNA-binding domain
CDDcd000182.27E-292383No hitNo description
SMARTSM003804.9E-322487IPR001471AP2/ERF domain
PROSITE profilePS5103222.5632481IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-282582IPR001471AP2/ERF domain
PRINTSPR003673.5E-92536IPR001471AP2/ERF domain
PRINTSPR003673.5E-94763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MDERPWILGA GESMAGKVTG RKSGYRGARM RVWGKWVSEI RLPKKKTRVW LGTYPTEEMA  60
ARAHDVGALA FKGKSAVLNF PHLRDSLPRP ASLSPRDVQA AAAKAAAMGG RVVLGSAPDP  120
VMNSAPPSPP SWAPNDADLE TDLGEITDLP CLESSYHEST SSFDNFDAAE EWIPWGAEDD  180
FSDRVGTGVI MINSTFTFGV NGSDTTSFPQ VDYD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-141482373Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678318602
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023739482.12e-44dehydration-responsive element-binding protein 3-like
RefseqXP_024972116.12e-44ethylene-responsive transcription factor ERF039-like
TrEMBLA0A3G2SFE07e-44A0A3G2SFE0_POGCB; AP2/ERF-domain containing protein
STRINGEMJ036631e-42(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-41ERF family protein