PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678317728
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 272aa    MW: 29903.7 Da    PI: 5.2225
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678317728genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58e-19127177255
        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIr p   + k  r++lg+++t+ eAa+a+++a+  l+g
  678317728 127 HYRGVRQRP-WGKFAAEIRNP---NkKGSRIWLGTYDTPAEAARAYDRAAFGLRG 177
                7********.**********9...4345**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-31126186IPR001471AP2/ERF domain
CDDcd000185.48E-30127185No hitNo description
PfamPF008474.1E-14127177IPR001471AP2/ERF domain
PROSITE profilePS5103223.933127185IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-22127187IPR016177DNA-binding domain
SMARTSM003803.7E-37127191IPR001471AP2/ERF domain
PRINTSPR003674.6E-13128139IPR001471AP2/ERF domain
PRINTSPR003674.6E-13167187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MESPDETSSV LERIRQHLLD DSAFMETYSS FSIDSQFSRS SSDASSVVSD FTFTSSPVSA  60
DMGVSPFLMD FAAPEAQFLD CETKPVVGKQ NKKRKPEISV TIPSAEPERK VDWVFSSETA  120
AVEDRRHYRG VRQRPWGKFA AEIRNPNKKG SRIWLGTYDT PAEAARAYDR AAFGLRGSKA  180
ILNFPLEIGN SMAAAVDDRN LKRKVESIET TKVAAEVKTE VAQAECSGTM PMPLTPSNWT  240
AVWDCGNGIF EIPPLSPLSP HPSFGFPGVI VV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-28126188163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A7e-28126190468ATERF1
3gcc_A7e-28126190468ATERF1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00549DAPTransfer from AT5G47230Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678317728
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101098.13e-64ethylene-responsive transcription factor 5
RefseqXP_012858577.16e-64PREDICTED: ethylene-responsive transcription factor 5-like
TrEMBLA0A2Z7BSJ61e-70A0A2Z7BSJ6_9LAMI; Ethylene-responsive transcription factor 5-like
STRINGMigut.F00527.1.p2e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9632389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.16e-35ERF family protein