PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678317270 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | Dof | ||||||||
Protein Properties | Length: 255aa MW: 28512.1 Da PI: 9.2763 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.4 | 7.8e-39 | 23 | 82 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e +l+cprCds ntkfCyynnyslsqPr+fCk+CrryWt+GGalrnvP+Ggg+rk+kk++ 678317270 23 EPSLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPIGGGCRKSKKMK 82 56789***************************************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-26 | 23 | 80 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.7E-33 | 25 | 80 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.357 | 26 | 80 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 28 | 64 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010052 | Biological Process | guard cell differentiation | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MSGDEGKPEQ QRRKKSAAAR AQEPSLRCPR CDSPNTKFCY YNNYSLSQPR HFCKTCRRYW 60 TRGGALRNVP IGGGCRKSKK MKGSSKDVGG LRFFQGISPA MDFQSASQFA DISNNHPILA 120 TPPPSFSLDP NYAGTSFGMP FKPANLTALF QEPGGSYRSL ASSIESLSCM NQDLHWKLQQ 180 QRLAPNFITP SIEAPPAETT TLQKCQPLLF HNLEISSNKQ QQSDDVRNPT ELFFDTHYAT 240 TAAIWSNIQS WTDFP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678317270 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022842998.1 | 8e-74 | dof zinc finger protein DOF5.7-like | ||||
TrEMBL | A0A1U8N746 | 2e-71 | A0A1U8N746_GOSHI; dof zinc finger protein DOF5.7-like | ||||
STRING | Gorai.008G094000.1 | 1e-71 | (Gossypium raimondii) | ||||
STRING | XP_009774290.1 | 1e-71 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5242 | 22 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 3e-55 | Dof family protein |