PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678316407
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 406aa    MW: 44142 Da    PI: 7.327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678316407genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.51e-16211267359
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+l  +++++ + 
  678316407 211 DAKRMRRMLSNRESARRSRRRKQAHLSELETQVSQLRGENSSLLKRLTDISQKYNEA 267
                68******************************************9999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.9E-13208265No hitNo description
SMARTSM003383.9E-19209273IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.84211266IPR004827Basic-leucine zipper domain
PfamPF001702.3E-14212265IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.03E-12213263No hitNo description
CDDcd147021.10E-6214265No hitNo description
PROSITE patternPS000360216231IPR004827Basic-leucine zipper domain
PfamPF124982.3E-31280402IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MADPCWLSHA PPNRHRREAD LDQQSASVTG PSSNDLRISR SPSEWALHKF LQEAALPDRV  60
SGVPQSGDST EIKVNHEVQK DDRPREIVAP PNIPIDSEAY QAFLKSRLDL ACAAVAMNWA  120
SSPKSQEAVP AASEVGSQAS NSSHMKASDL ETVKSQDRDS MQPPGTLVAP AISRKSGAQV  180
RSTTSGSSGE LSDYDDADAE TVDTQNMDPA DAKRMRRMLS NRESARRSRR RKQAHLSELE  240
TQVSQLRGEN SSLLKRLTDI SQKYNEAAVD NRVLKADIET LRAKVKMAEE SVKRITGFNP  300
LFQAMSEITT MEIPAFNGSP SDASADASAT LQEQPKLQYY QTSTSNHIID HRTQSSLVDT  360
ISAESQPQKA SLGVGATRTG GSGSLPRVAS LEHLTKRIRE GAGGKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225232RRSRRRKQ
2227232SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678316407
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091948.11e-152light-inducible protein CPRF2
SwissprotQ990905e-98CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLS8CZW01e-137S8CZW0_9LAMI; Uncharacterized protein
STRINGMigut.N01912.1.p1e-126(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.12e-66bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]