PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678310463
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 384aa    MW: 41648.7 Da    PI: 7.5574
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678310463genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.91.9e-3793153262
     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                +ek+l+cprC+s++tkfCyynny+++qPr++C++C+ryWt+GG++rnvPvG+grrk+k+ s
  678310463  93 PEKILPCPRCNSSDTKFCYYNNYNINQPRHYCRSCQRYWTAGGTMRNVPVGAGRRKSKNPS 153
                78999****************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-2989150IPR003851Zinc finger, Dof-type
PfamPF027013.4E-3195151IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.46397151IPR003851Zinc finger, Dof-type
Gene3DG3DSA:2.20.25.106.4E-497135No hitNo description
PROSITE patternPS01361099135IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MNKNLKLFGM EIFLPPEQDD SSPESSGGEQ LRRIDEEEHD AIDDYLLDLD KSHDGNPSSE  60
LDGDTKPPLV PDSANDHNTE NGDKIPRAKL KKPEKILPCP RCNSSDTKFC YYNNYNINQP  120
RHYCRSCQRY WTAGGTMRNV PVGAGRRKSK NPSSSQCHHI TVSEALLAAK LDACEGFHCL  180
KLEHNGTLLS FGSESVGGSA GLTGKQAVKN VEGKKGSCSN RGAGNGFQTP LVLNMNGLPV  240
PGARMPWNSS LIPTPVILPQ CHNLDENSAI PWQAIPAPAA SQGIINRVVS KHSRSGQLKT  300
SNMDNSGDSV LVPKALRLDD PAEAAKSTIW TTLGISHHDS LNHKSIFQAF QPKTGQEKPF  360
PAISPALLAN PSALSRATFF HESA
Cis-element ? help Back to Top
SourceLink
PlantRegMap678310463
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071702.11e-87cyclic dof factor 3-like
TrEMBLA0A2G9GJU73e-91A0A2G9GJU7_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53224122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62430.15e-58cycling DOF factor 1