PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678307242

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

TCP

Protein Properties

Length: 279aa MW: 32105 Da PI: 10.3297

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678307242	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.6	2.7e-35	97	224	6	131
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.....kaaksaa.kskk 99 d+hski T++g+RdRR+Rls+++a+rfFdLqd LGfdk+s t++WLl+ + aikel++ ++++e e++s s + + + ++++ + +s + 678307242 97 DKHSKINTARGPRDRRIRLSLDVARRFFDLQDLLGFDKASRTLDWLLKSSRIAIKELASKLKNPHKEEEKVSVSDKPA----SvehgvGKMSKRKkPSGS 192 99********************************************************666663332222222222....123456444444414444 PP TCP 100 sqksaasalnlakesrakarararertrekmr 131 + +s ++ + esr ar+rarert++k+r 678307242 193 AASSRRGVRVVGMESRRMARERARERTSQKKR 224 4444444566666************99976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	30.315	95	153	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	4.3E-32	97	224	IPR005333	Transcription factor, TCP
PROSITE profile	PS51370	8.81	205	222	IPR017888	CYC/TB1, R domain

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MHPSSNYRSS FVIRTELEKI LYPQNEFEFD FDFDFDYPFF RLPTDSSHIR NHMEFGNLQH 60 QFLGIYTNHT PTGDSLEEPT QNRNGEGRKQ QSRRFADKHS KINTARGPRD RRIRLSLDVA 120 RRFFDLQDLL GFDKASRTLD WLLKSSRIAI KELASKLKNP HKEEEKVSVS DKPASVEHGV 180 GKMSKRKKPS GSAASSRRGV RVVGMESRRM ARERARERTS QKKRRLFTQT YNLPSSNAHV 240 EAASSSSYYD IGFAFEDPPG LGPLLSDCLH QDLVYSSSK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678307242

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2482	22	56

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	5e-25	TCP family protein