PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678305776
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 363aa    MW: 40281.3 Da    PI: 6.0797
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678305776genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP87.23.8e-2798209366
        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................................... 65 
                g+kdrhsk++T +g+RdRR+Rls+++a +++ Lqd+LG+ ++sk ++WLl + k++i +l+ +                                     
  678305776  98 GGKDRHSKVCTVRGLRDRRIRLSVPTAVQLYSLQDRLGLSQPSKVVDWLLDATKHEIEKLPPLpainmsmnmllpitptpplpfhfqpyapthflgkdlg 197
                79***********************************************************997777777777766666666666666665555555555 PP

        TCP  66 ...........s 66 
                            
  678305776 198 lvgamglgmgmA 209
                555555554440 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.4E-2599159IPR005333Transcription factor, TCP
PROSITE profilePS5136928.24899157IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MRTQTALPLD PSSYQLHLLR CIARSATGES VTHLLRKSAL PEEKKRDSPG PEMMADGGDK  60
AEEVAERTAP TAAASCSRKW SSSSYKNPRI VRVSRSFGGK DRHSKVCTVR GLRDRRIRLS  120
VPTAVQLYSL QDRLGLSQPS KVVDWLLDAT KHEIEKLPPL PAINMSMNML LPITPTPPLP  180
FHFQPYAPTH FLGKDLGLVG AMGLGMGMAT DQGVMKEKQE EAPPTEEVGL VGQNLTLNNS  240
AASFQNPYFH WDLHNPSHFG LGAAGFNFPF HTHTHAEEEE EEEEEEEDYD DKQKREEEED  300
SSNQIQNSFH CTPHYFCSTP FLHDPSLLPP TTLKLINQPA SSAAPPHSDC STATPQLKTV  360
EPQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A4e-17104158155Putative transcription factor PCF6
5zkt_B4e-17104158155Putative transcription factor PCF6
Cis-element ? help Back to Top
SourceLink
PlantRegMap678305776
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854041.19e-51PREDICTED: transcription factor TCP5
STRINGMigut.D01635.1.p3e-50(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8212499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.11e-41TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5