PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678304752 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 272aa MW: 31343.7 Da PI: 9.7409 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.1 | 1.4e-10 | 151 | 194 | 3 | 53 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 +GV++ k+ +W A I++ +k+++lg+ + eeAa+++++a+ 678304752 151 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVSSQEEAARLYDRAAFMC 194 79**98..47*********4.....5*********************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 8.9 | 139 | 205 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-8 | 150 | 197 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.5E-5 | 150 | 196 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.0E-4 | 150 | 207 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-6 | 153 | 196 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence Send to blast |
MCCDVLNPAA PGTVRSEWNE KGKGKEMRGY PAVFYQAIVF LWEHSIASVS QFLNLYLGSR 60 IDTSSKMVSI RRRRQLALCT EHNSSSNDLP SNHDAFKPKE ETTSGNGVCP SYGSVYSSSK 120 MQLQDASMVP EIKRRKQHRR KRVENQEPCI MRGVYFKNMK WQAAIKVDKK QIHLGTVSSQ 180 EEAARLYDRA AFMCRREPNF ELSEEEKQEL SKFSWDEFLE MTRVAINNKK SQRRTGTPAA 240 KSSPETETKN MMIIPFEKTK LEPISDWSFK YS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 141 | KRRKQHRRKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678304752 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022758728.1 | 8e-64 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_022758729.1 | 8e-64 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_022758731.1 | 8e-64 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_022758732.1 | 8e-64 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_022758733.1 | 8e-64 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
TrEMBL | A0A4D8ZWT0 | 5e-61 | A0A4D8ZWT0_SALSN; Uncharacterized protein | ||||
STRING | Migut.D02503.1.p | 6e-59 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6246 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 3e-39 | ERF family protein |