PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678304752
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 272aa    MW: 31343.7 Da    PI: 9.7409
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678304752genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.11.4e-10151194353
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                 +GV++  k+ +W A I++      +k+++lg+  + eeAa+++++a+   
  678304752 151 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVSSQEEAARLYDRAAFMC 194
                79**98..47*********4.....5*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.9139205IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-8150197IPR016177DNA-binding domain
PfamPF008475.5E-5150196IPR001471AP2/ERF domain
SMARTSM003801.0E-4150207IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-6153196IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MCCDVLNPAA PGTVRSEWNE KGKGKEMRGY PAVFYQAIVF LWEHSIASVS QFLNLYLGSR  60
IDTSSKMVSI RRRRQLALCT EHNSSSNDLP SNHDAFKPKE ETTSGNGVCP SYGSVYSSSK  120
MQLQDASMVP EIKRRKQHRR KRVENQEPCI MRGVYFKNMK WQAAIKVDKK QIHLGTVSSQ  180
EEAARLYDRA AFMCRREPNF ELSEEEKQEL SKFSWDEFLE MTRVAINNKK SQRRTGTPAA  240
KSSPETETKN MMIIPFEKTK LEPISDWSFK YS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132141KRRKQHRRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678304752
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022758728.18e-64ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758729.18e-64ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758731.18e-64ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758732.18e-64ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758733.18e-64ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A4D8ZWT05e-61A0A4D8ZWT0_SALSN; Uncharacterized protein
STRINGMigut.D02503.1.p6e-59(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-39ERF family protein