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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
678302743 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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| Family |
BBR-BPC |
| Protein Properties |
Length: 281aa MW: 30878 Da PI: 9.8481 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 678302743 | genome | UGSP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 320.7 | 4.4e-98 | 1 | 281 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllalllv 87
md+d+ rn+gyyep lk++lglqlmss++erd+k+ n a+ ++++a+++rd +++ rd+++++ ++k+l++l+
678302743 1 MDEDSL--RNWGYYEPP--LKSHLGLQLMSSVTERDTKPflsGRDNPAVVSSNGAFHTRDyivtepplsnIDY-VRDSWINH--------RDKFLHMLPG 87
788855..9********..********************999666778********************99999.99*****9........7899999994 PP
GAGA_bind 88 enslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaders 187
+ +pv ++ + +slq++++ + +e++ +e + ++ke+ ++k+++ a+ +k++kakk+kk ++ ++++++++ +r+
678302743 88 NG----YNPVLTEPSGS---HHSLQMVHQA------EA-----SNETMLANEGPASKKESGSTKRGAPAAAAKTSKAKKPKKGPSPKENNSNASV--QRA 167
33....34443333333...3334442222......11.....2234455566778888888899999999***********6655544444444..79* PP
GAGA_bind 188 kaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287
k+ kks+++++ngv++D++++P+PvC+CtG+++qCY+WG+GGWqSaCCtttiS++PLP+stkr+gaRiagrKmSqgafkk+LekLa+e yd++np+DL++
678302743 168 KTVKKSVEVSINGVDMDITGIPIPVCTCTGTPQQCYRWGCGGWQSACCTTTISMHPLPMSTKRKGARIAGRKMSQGAFKKVLEKLASEDYDFGNPIDLRT 267
**************************************************************************************************** PP
GAGA_bind 288 hWAkHGtnkfvtir 301
+WAkHGtnkfv ir
678302743 268 YWAKHGTNKFVVIR 281
************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MDEDSLRNWG YYEPPLKSHL GLQLMSSVTE RDTKPFLSGR DNPAVVSSNG AFHTRDYIVT 60
EPPLSNIDYV RDSWINHRDK FLHMLPGNGY NPVLTEPSGS HHSLQMVHQA EASNETMLAN 120
EGPASKKESG STKRGAPAAA AKTSKAKKPK KGPSPKENNS NASVQRAKTV KKSVEVSING 180
VDMDITGIPI PVCTCTGTPQ QCYRWGCGGW QSACCTTTIS MHPLPMSTKR KGARIAGRKM 240
SQGAFKKVLE KLASEDYDFG NPIDLRTYWA KHGTNKFVVI R
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
