PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678301223
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 356aa    MW: 38527.8 Da    PI: 6.0507
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678301223genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.74.4e-164392255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr+++ +gr++AeIrdp     +  r +lg+f+tae Aa a++ a+++++g
  678301223 43 RYRGVRRRP-WGRYAAEIRDPL----SkERRWLGTFDTAEAAACAYDCAARAMRG 92
               59*******.**********73....35999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.3E-294399IPR001471AP2/ERF domain
PfamPF008471.9E-94392IPR001471AP2/ERF domain
SMARTSM003809.6E-3343106IPR001471AP2/ERF domain
CDDcd000181.26E-174399No hitNo description
PROSITE profilePS5103221.91843100IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-2043100IPR016177DNA-binding domain
PRINTSPR003676.0E-94455IPR001471AP2/ERF domain
PRINTSPR003676.0E-96682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MEETLRRLNE TLSSDSTALP KRCGAAKRSI KDGSSVSGGG TMRYRGVRRR PWGRYAAEIR  60
DPLSKERRWL GTFDTAEAAA CAYDCAARAM RGVKARTNFV YPNSPTHPVS ENLIPPFGYG  120
KASQSSIFGS RPFLSASSVV NPNLGSNNSL NLLLLNDYLR SPGSKFSDSV SFGSPLQERL  180
PVNYININPD YVNNIPCNAS SQATTLNEIK PSESCFSICS QNLSDLDTHS PVDRIEFFPT  240
EVSGSGLLQD VLNGFFPKPV MAEVKSEASS VPTFLDDTSD NRGCKDEILG FPIDHCRFSH  300
QFESRGGGLS GNEMENSMAP YGGDSSNAPA ATSGFLGDIV HYQDALSAYA ANLQNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1743991471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678301223
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086646.11e-122ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2G9GV381e-114A0A2G9GV38_9LAMI; Uncharacterized protein
STRINGMigut.K00605.1.p8e-84(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-16DORNROSCHEN-like