PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678297997
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 275aa    MW: 29102.2 Da    PI: 4.2007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678297997genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483.2e-154089155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               + +kG+r ++ +g+Wv+eIr+p++   ++r++lg++ tae+Aa+a++ a ++l+g
  678297997 40 PVFKGIR-CR-SGKWVSEIREPRK---TTRIWLGTYATAEMAAAAYDVATLALKG 89
               579***9.55.6*********843...5*********************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.9E-94089IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-244198IPR001471AP2/ERF domain
PROSITE profilePS5103218.4264197IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-174198IPR016177DNA-binding domain
SMARTSM003802.6E-2241103IPR001471AP2/ERF domain
CDDcd000188.13E-134299No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MDLDSPPSPQ HVTELSSPDS GAPASAVAPQ IPSPRSGRHP VFKGIRCRSG KWVSEIREPR  60
KTTRIWLGTY ATAEMAAAAY DVATLALKGP EPALNFPHLA TCYPVPASQG AGDIRAAAAA  120
ASGLIKCDTG GSVEVQIEFP PADEGTNHFP EPLSVKSSDT GDTTESPLSG HETEGLSNPN  180
SPHPPPPPSA LEKDIPAFLL PDATGDAFSP GEEFVDEEEL FEMPKLLAEM AEGMLVSPPR  240
LKSASYEMEE QEEVSANFSG DDNLWSYSVL QGGHD
Cis-element ? help Back to Top
SourceLink
PlantRegMap678297997
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.17e-28ERF family protein