PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678297503
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 533aa    MW: 59257.4 Da    PI: 4.8455
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678297503genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.98.4e-5391371128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                lp+G+rF+Ptdeelv++yL  k++g++ e+ ++i+e+d++k ePwdLp+  ++++ ++ew+fF+++d+ky++g+r nrat++gyWkatgkd++++sk+g+
  678297503   9 LPVGYRFRPTDEELVNHYLSLKIRGHDKEV-SAIREIDVCKQEPWDLPAlsAIESIDNEWFFFCPKDRKYQNGQRLNRATEKGYWKATGKDRTIVSKRGS 107
                799************************999.88***************4457888899****************************************** PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                ++g+kktLvfy+grap+g++t+Wv+heyr+
  678297503 108 KIGMKKTLVFYTGRAPEGKRTNWVIHEYRA 137
                ****************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.32E-575160IPR003441NAC domain
PROSITE profilePS5100555.129160IPR003441NAC domain
PfamPF023651.0E-2610136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    Send to blast
MAVLTADDLP VGYRFRPTDE ELVNHYLSLK IRGHDKEVSA IREIDVCKQE PWDLPALSAI  60
ESIDNEWFFF CPKDRKYQNG QRLNRATEKG YWKATGKDRT IVSKRGSKIG MKKTLVFYTG  120
RAPEGKRTNW VIHEYRAIDK ALDGTHPGQS GFVLCRLFKK TERTQDNKDE ITLTEDGDIF  180
SSPAVLKSSA EEEHSDSVTP VSAAPDEKQT SVENHTNSRS QKSVVYAHVP TDLQSYSGKS  240
DEMESTDSIY ASLDADLDFL RERMGSTMDY SSDWKLFSPL HTQVESELRS SYLCEGFPGD  300
LCNYPSTNDA GASDFWNSVI TSPEQLNFDG RYSFSALDSP NGMNIQPLVK ESNSSCDSDG  360
EVSQKQNEHN PVADMIAEEI KLESPFPTES TADFIHNQFP EEGAFTGIKI RSRTVSNQSN  420
PGTTGTQGSA PRRIRLQKKL QVGPVQFSAP KEVKSSSSTQ EDSDKPSEEQ PWSNSTASSS  480
TPDEADIRVS ESSSDSNDYK RFSPKISVFA SSAIVVSLSL GVLVVALWAS FLR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-46416512170NO APICAL MERISTEM PROTEIN
1ut4_B5e-46416512170NO APICAL MERISTEM PROTEIN
1ut7_A5e-46416512170NO APICAL MERISTEM PROTEIN
1ut7_B5e-46416512170NO APICAL MERISTEM PROTEIN
4dul_A5e-46416512170NAC domain-containing protein 19
4dul_B5e-46416512170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678297503
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075874.11e-160NAC domain-containing protein 62
TrEMBLS8DVI61e-147S8DVI6_9LAMI; Peroxidase
STRINGMigut.F00136.1.p1e-134(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33632448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.12e-80NAC domain containing protein 62