PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678294531
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 299aa    MW: 33141.2 Da    PI: 8.5936
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678294531genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-1990140155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                ++++GVr+++ +g+W+AeIrdp     r +r +lg++ taeeAak +++a+ +l+g
  678294531  90 KKFRGVRRRP-WGKWAAEIRDPL----RrTRLWLGTYETAEEAAKVYDRAAVQLRG 140
                59********.**********73....45************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.78E-3190147No hitNo description
SMARTSM003801.1E-3591154IPR001471AP2/ERF domain
PROSITE profilePS5103224.01291148IPR001471AP2/ERF domain
PfamPF008471.8E-1291140IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-2191148IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-3091148IPR001471AP2/ERF domain
PRINTSPR003672.2E-1092103IPR001471AP2/ERF domain
PRINTSPR003672.2E-10114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MSFPCGVRFS EHVTRTTAVS GFLRRTLRIS VTDQDATDSS SDEEGVSLKR RHVRRYVNEV  60
VVLKPEKGGG NFLRRANAGK QKKEAVDVDK KFRGVRRRPW GKWAAEIRDP LRRTRLWLGT  120
YETAEEAAKV YDRAAVQLRG PNALTNFSNL PTKALKTTSG EEDSQSSDKS PSSVLRCVTR  180
ENPPNSPSKK DIFADIGNPV LIPEQIDLTT GFLDDAFCLD DISNDDIVFG SNLVIGSGSP  240
LWPYDDYFKQ DICDVFGSDI KPGALELGIS KYPQENSTAQ TKIPSPTETQ KSHATLSKA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-2090161470ATERF1
3gcc_A6e-2090161470ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678294531
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080873.13e-65ethylene-responsive transcription factor CRF2
TrEMBLS8E6385e-63S8E638_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.A00686.1.p2e-61(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.22e-42cytokinin response factor 2