PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_34986-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRF | ||||||||
Protein Properties | Length: 408aa MW: 45353.7 Da PI: 9.0408 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 73.7 | 2.1e-23 | 136 | 180 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+ TRIUR3_34986-P1 136 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 180 79****************************************997 PP | |||||||
2 | QLQ | 54.8 | 2.9e-19 | 77 | 112 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll i+k TRIUR3_34986-P1 77 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 112 8*****************************999975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00951 | 3.0E-10 | 76 | 112 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Pfam | PF08880 | 2.0E-13 | 77 | 110 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51666 | 21.277 | 77 | 112 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51667 | 24.151 | 136 | 180 | IPR014977 | WRC domain |
Pfam | PF08879 | 1.5E-19 | 137 | 179 | IPR014977 | WRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0008285 | Biological Process | negative regulation of cell proliferation | ||||
GO:0048364 | Biological Process | root development | ||||
GO:0048366 | Biological Process | leaf development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence Send to blast |
MELGQVLGYT PPATKDARSG GGFTQAAACP YPYPSPFLDE QKMLSFSKAA AAHQPPSGMD 60 FGRSNEQRLL LARSKMPFTP SQWMELEHQA LIYKYLNAKA PIPSGLLISI SKSFRPSSDR 120 MPWRPVYQGF TNADSDPEPG RCRRTDGKKW RCSKEAMAEH KYCERHINRN RHRSRKPVEN 180 QTRKNAKETP AAGSISAPVS QGGCKKAKAG DELKPGSVSY WTDNLNRAMV SKARGNNPEE 240 GNSAPLLNST NQQHTLSLFS QLKQQSKPDK FSPAVDSESI SSNTVLKPWE RSNQQSSKDV 300 SSTTLHDRGC LQSVLQDFSM HKNDKIESQK NNASVPSTFY SSTEGRHISC LASNMMQVQE 360 DCISSSWEIP QGGPLGEILT NSKNTDDLTN KCESRSYGWL LSLDEHEM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020196595.1 | 0.0 | growth-regulating factor 9-like | ||||
Swissprot | Q9FRG8 | 0.0 | GRF9_ORYSJ; Growth-regulating factor 9 | ||||
TrEMBL | M8ASB0 | 0.0 | M8ASB0_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_34986-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13124 | 25 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 9e-46 | growth-regulating factor 2 |
Publications ? help Back to Top | |||
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