PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34986-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRF
Protein Properties Length: 408aa    MW: 45353.7 Da    PI: 9.0408
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34986-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC73.72.1e-23136180145
              WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                      d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+
  TRIUR3_34986-P1 136 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 180
                      79****************************************997 PP

2QLQ54.82.9e-1977112237
              QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                      +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll  i+k
  TRIUR3_34986-P1  77 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 112
                      8*****************************999975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.0E-1076112IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.0E-1377110IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.27777112IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.151136180IPR014977WRC domain
PfamPF088791.5E-19137179IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008285Biological Processnegative regulation of cell proliferation
GO:0048364Biological Processroot development
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MELGQVLGYT PPATKDARSG GGFTQAAACP YPYPSPFLDE QKMLSFSKAA AAHQPPSGMD  60
FGRSNEQRLL LARSKMPFTP SQWMELEHQA LIYKYLNAKA PIPSGLLISI SKSFRPSSDR  120
MPWRPVYQGF TNADSDPEPG RCRRTDGKKW RCSKEAMAEH KYCERHINRN RHRSRKPVEN  180
QTRKNAKETP AAGSISAPVS QGGCKKAKAG DELKPGSVSY WTDNLNRAMV SKARGNNPEE  240
GNSAPLLNST NQQHTLSLFS QLKQQSKPDK FSPAVDSESI SSNTVLKPWE RSNQQSSKDV  300
SSTTLHDRGC LQSVLQDFSM HKNDKIESQK NNASVPSTFY SSTEGRHISC LASNMMQVQE  360
DCISSSWEIP QGGPLGEILT NSKNTDDLTN KCESRSYGWL LSLDEHEM
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196595.10.0growth-regulating factor 9-like
SwissprotQ9FRG80.0GRF9_ORYSJ; Growth-regulating factor 9
TrEMBLM8ASB00.0M8ASB0_TRIUA; Uncharacterized protein
STRINGTRIUR3_34986-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131242529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.19e-46growth-regulating factor 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]