PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_34422-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 324aa MW: 36197.9 Da PI: 4.6675 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.3 | 5.7e-11 | 133 | 181 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 kG+r ++ g+W+AeI+dps+ ++l +f +a+eA +a++a +++++g TRIUR3_34422-P1 133 LKGIRHCP-LGKWAAEIKDPSK---GVCVWLDTFKSAKEAGRAYDAEARQIYG 181 59******.8*********965...4********************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 6.7E-19 | 132 | 195 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.674 | 132 | 189 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-15 | 133 | 190 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 6.1E-6 | 133 | 144 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-20 | 134 | 190 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.57E-19 | 134 | 190 | No hit | No description |
PRINTS | PR00367 | 6.1E-6 | 171 | 191 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MSGRALLADV KVPTVTRKVM EVTMRPEKKK PQRGGGGGHH FTRHGGRRGL SLDYDEEDFE 60 ADFKKFLADS RDYDLELGCG GVAEKDDDYE EVEIKPFAAI KRSLSVDDLS TMPIAGFDGL 120 AERSAKRKRK NQLKGIRHCP LGKWAAEIKD PSKGVCVWLD TFKSAKEAGR AYDAEARQIY 180 GKKAKVNFPE EPTGYVDFAS IQPLVPAMNS VAPVEAPIMD MYSDQGSNSC GYSDLGWEYE 240 TKSLDIPFLP LPKEHNLRLS RITNSLVPPV MENNAASSEP WMRYLMDDDV DELIDGLVNF 300 DEPQDVIGNM DLWSFDDMPV SGEF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020192774.1 | 1e-142 | ethylene-responsive transcription factor 1-like | ||||
Swissprot | Q6K7E6 | 4e-82 | ERF1_ORYSJ; Ethylene-responsive transcription factor 1 | ||||
TrEMBL | T1NUA2 | 0.0 | T1NUA2_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_34422-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1039 | 38 | 134 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-25 | ERF family protein |