PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34215-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 278aa    MW: 30201.8 Da    PI: 9.6153
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34215-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.92e-32111531128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............kvkaeekew.yfFskrdkkyatgkrknratksg 81 
                      +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd++             +v+a+  e+    ++++ ++a g+   r t+ g
  TRIUR3_34215-P1  11 VPPGFRFHPTEEELLTYYLAKKVASQRIDL-DVIPDVDLNKLEPWDIQGefiheflhnassHVRAHG-ELnLLAMEKRMQSAAGSALARRTT-G 101
                      69****************************.9***************94478888776544333332.442344444444455666666544.5 PP

              NAM  82 yWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +at +  +   +     ++  +g++ktLvfykgrap+g+k+dW+mheyrl
  TRIUR3_34215-P1 102 TCSATRTRSTPRGRaptapGSGRIGMRKTLVFYKGRAPHGHKSDWIMHEYRL 153
                      55555554433333345558888***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-337163IPR003441NAC domain
PROSITE profilePS5100535.76511206IPR003441NAC domain
PfamPF023651.9E-1812153IPR003441NAC domain
SuperFamilySSF1019412.48E-33194206IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQGEF  60
IHEFLHNASS HVRAHGELNL LAMEKRMQSA AGSALARRTT GTCSATRTRS TPRGRAPTAP  120
GSGRIGMRKT LVFYKGRAPH GHKSDWIMHE YRLDDAVPAP TATNPAAAGD ASTYYSGTSS  180
SPIRGVAGDQ SSAQEDGWVI CRVFKKKNIV VNQGQNGGGG GAASNKLAGV APMERSQSNC  240
SSTLGRRQSK RRESETQETG ADLDVKGQII ELREDRVW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-261120815170Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2491205e-97AK249120.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf17a09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177243.11e-103NAC domain-containing protein 43-like
TrEMBLM7ZFU10.0M7ZFU1_TRIUA; NAC domain-containing protein 43
STRINGTRIUR3_34215-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16506913
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.11e-51NAC domain protein 66