PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIUR3_34214-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 224aa MW: 24329.7 Da PI: 9.5514 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.1 | 1.2e-21 | 11 | 134 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +r +Pt+ e+v++yL + ++g++l+ + i++++i +eP+dL + + ++ + +fF++ ++k+ ++ ++ r t +g+W + k++ TRIUR3_34214-P1 11 YRLSPTEVEVVTYYLPRLLSGETLHGVDKlIHRANISGCEPKDLAAryapvpqA--VSSGDRFFFTTCKSKNGSKYQSVRGTGTGTWTIQ-KTT 101 6899*******************7765555**************8535554322..244478*************************976.668 PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e+++ g +vg k L f +kg++t Wvm+eyr TRIUR3_34214-P1 102 EICH-AGVKVGEVKNLSFK----KKGKSTGWVMEEYRC 134 8988.899**********8....78899********95 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.713 | 7 | 154 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.23E-22 | 11 | 152 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-13 | 11 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence Send to blast |
GLDVDDVFHH YRLSPTEVEV VTYYLPRLLS GETLHGVDKL IHRANISGCE PKDLAARYAP 60 VPQAVSSGDR FFFTTCKSKN GSKYQSVRGT GTGTWTIQKT TEICHAGVKV GEVKNLSFKK 120 KGKSTGWVME EYRCLLPEAT VSDGVKVFCK MHLAQHAPDA ARQESEAYKL QQPQPEAVTQ 180 STHAQKRPAT AAAAEPHPAS PKKRMRGAVP VPAPATSSFT AAAP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020197295.1 | 1e-137 | uncharacterized protein LOC109783104 | ||||
TrEMBL | T1NTQ2 | 1e-166 | T1NTQ2_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_34214-P1 | 1e-167 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1832 | 27 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18400.1 | 4e-09 | NAC domain containing protein 58 |