PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_33949-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 269aa MW: 30594.6 Da PI: 8.8931 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.3 | 2.6e-48 | 64 | 190 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPt+eel+ +yL + + gkkl++ ++i +++iy+++PwdLp ++k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+ TRIUR3_33949-P1 64 PGFRFHPTEEELLGFYLSRVALGKKLHF-DIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSSg 156 9*************************99.99***************888999****************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++glkktLvfy+grap+g+ktdWvm+eyrl TRIUR3_33949-P1 157 dPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 190 66778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.4E-58 | 57 | 210 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.939 | 62 | 210 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-24 | 64 | 190 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MARNQDAVAE ERRLADEDRR VAAEERKVAL EERKRLYNNL STQQQSMAMA AVASPTMEVD 60 QDLPGFRFHP TEEELLGFYL SRVALGKKLH FDIIGTLNIY RHDPWDLPGM AKIGEREWYF 120 FVPRDRKAGS GGRPNRTTER GFWKATGSDR AIRSSGDPKR VIGLKKTLVF YQGRAPRGTK 180 TDWVMNEYRL PDTGAPPPQE DTVLCKVYRK ATPLKELEQR AFAMEEMKQR YGSNDPPLAA 240 PIHHGGEIEE VEGHHRVPLG SHNAELLTA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3swm_B | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3swm_C | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3swm_D | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3swp_A | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3swp_B | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3swp_C | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3swp_D | 4e-49 | 64 | 212 | 22 | 170 | NAC domain-containing protein 19 |
3ulx_A | 3e-49 | 64 | 210 | 17 | 168 | Stress-induced transcription factor NAC1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK367963 | 0.0 | AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020190295.1 | 1e-131 | NAC domain-containing protein 72-like | ||||
Swissprot | Q10S65 | 1e-116 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | M7YJU3 | 0.0 | M7YJU3_TRIUA; Putative NAC domain-containing protein 94 | ||||
STRING | TRIUR3_33949-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 3e-86 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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