PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_33668-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YB | ||||||||
Protein Properties | Length: 201aa MW: 20990.8 Da PI: 8.4967 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 47.2 | 5.4e-15 | 4 | 75 | 24 | 95 |
NF-YB 24 nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 +a+i da +v+ cv efi +vt +a + + +k ++g ++ a+ lG+ +yv pl+ +l++yre+ g TRIUR3_33668-P1 4 RARIHPDATALVDRCVKEFINMVTVQAEEERGMDGKKKMTGLHVIKAFDILGYSNYVGPLTEHLRRYREVTG 75 6899*****************************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47113 | 3.24E-12 | 3 | 75 | IPR009072 | Histone-fold |
Gene3D | G3DSA:1.10.20.10 | 1.6E-16 | 4 | 88 | IPR009072 | Histone-fold |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MDPRARIHPD ATALVDRCVK EFINMVTVQA EEERGMDGKK KMTGLHVIKA FDILGYSNYV 60 GPLTEHLRRY REVTGYVGVR RSNKRATAQR QAATGQMAPQ PSDTALGPPP AGITVQGELP 120 AAAVTTGGGG DGTTAVRLYI GCIAAGRCHG ARSGVGGHCD AATGRLNQQH HGCSALHCVS 180 GALSGVALAS SSRMPPACDD E |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M7ZKT0 | 1e-145 | M7ZKT0_TRIUA; Nuclear transcription factor Y subunit B-6 | ||||
STRING | TRIUR3_33668-P1 | 1e-146 | (Triticum urartu) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 6e-12 | nuclear factor Y, subunit B6 |