PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_33467-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 241aa MW: 26645.3 Da PI: 4.5458 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.3 | 4.7e-10 | 9 | 32 | 22 | 47 |
T-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqky 47 + W++Ia++m+ gRt++++k++w+ + TRIUR3_33467-P1 9 R-WSLIANHMP-GRTDNEIKNYWNAH 32 4.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 16.926 | 1 | 37 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.72E-8 | 7 | 38 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.0E-12 | 8 | 33 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 9.72E-8 | 9 | 33 | No hit | No description |
Pfam | PF00249 | 9.2E-8 | 9 | 33 | IPR001005 | SANT/Myb domain |
Pfam | PF06640 | 2.5E-4 | 51 | 80 | IPR010588 | Myb-related protein P, C-terminal |
Pfam | PF06640 | 4.8E-19 | 97 | 240 | IPR010588 | Myb-related protein P, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MHFVELAHRW SLIANHMPGR TDNEIKNYWN AHLSRQIHSF RHTYTAGNET TITIDINRLS 60 AASKRRGGRA PRSSTKKQPV PEPTKSKEGC SPVRAISSST SRLPQGDSDQ NQPINNITDD 120 MPCSEEATGM DPVDLNGDVL ETNYANNSMD QIGILEEGRE IEALLSSIGD MPASVLTGID 180 YGGHSPRVED LLDMDWEGFA SHLFDQQAQN DLLQTAEPQI TTGSESDKLE SFVSWLFSDA 240 S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020178489.1 | 1e-128 | myb-related protein P-like | ||||
TrEMBL | M7Y426 | 1e-180 | M7Y426_TRIUA; Myb-related protein P | ||||
STRING | TRIUR3_33467-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP79 | 38 | 563 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 3e-18 | myb domain protein 12 |