PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_33327-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 340aa    MW: 36301.8 Da    PI: 9.7816
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_33327-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.72.4e-3397154259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +Dgy+WrKYGqK vk+s+fprsYYrCt+++Cpvkk+vers +d  vv++tYeg+H+h+
  TRIUR3_33327-P1  97 EDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCPVKKRVERSYQDAAVVITTYEGKHTHP 154
                      8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.0E-3581156IPR003657WRKY domain
SuperFamilySSF1182902.48E-2988156IPR003657WRKY domain
PROSITE profilePS5081131.9591156IPR003657WRKY domain
SMARTSM007743.2E-3996155IPR003657WRKY domain
PfamPF031062.3E-2697154IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MEVWTRGSFG GQIEALIQQH RSLGGFTGGA VEDEAGKCKQ EEGEGDDESK QAAADGEADK  60
TKKGAAKGKG AARVKGEKRP RQARFAFMTK SEVDHLEDGY RWRKYGQKAV KNSPFPRSYY  120
RCTTQKCPVK KRVERSYQDA AVVITTYEGK HTHPIPATLR GANHLLAAHA HAHGGHGLIH  180
PGMFRMPAPP GAFRPGDALG SFLQQQHAAM QHQQQVAAAG MAMRQANAMA SGHMQAPPAD  240
RGLAAAMAGG GSNAGDNLDR GSSMRLPPEG GEPGTGEAGE GLGLLSRVRL VIPDTAGREE  300
YQTMIAASSR AALGARVQVS WIMFATHSRP AAAADYPQWE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-2783156174WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00168DAPTransfer from AT1G29860Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY3418441e-113AY341844.1 Oryza sativa (japonica cultivar-group) WRKY3 mRNA, complete cds.
GenBankAY3418551e-113AY341855.1 Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds.
GenBankAY8706041e-113AY870604.1 Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198305.11e-115probable WRKY transcription factor 28
TrEMBLM7ZY370.0M7ZY37_TRIUA; Putative WRKY transcription factor 71
STRINGTRIUR3_33327-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62337173
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.17e-46WRKY DNA-binding protein 71