PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_33298-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 327aa MW: 36432.8 Da PI: 4.4562 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.5 | 7.9e-14 | 133 | 181 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 kG+r+++ g+W+AeI+dps+ ++lg+f +a+eAa+a++ +++++g TRIUR3_33298-P1 133 LKGIRQCP-LGKWAAEIKDPSK---GVCVWLGTFNSAKEAARAYDVEARRIYG 181 59******.8*********965...4*******************99999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.6E-26 | 132 | 195 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.742 | 132 | 189 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-17 | 133 | 190 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 7.7E-24 | 134 | 190 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.29E-23 | 134 | 190 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MSGRALLADI KVPMVTRKVM EVTVRPEKKK PQRGGGGGHR FTRHGGRRGL ILDYDEEDFE 60 ADFKKFLADS RDYDFELGCG GVAEKDDDYE EVEIKPFAAI KRSLSEDDLS TMPTAGFDGP 120 AERSAKRKRK NQLKGIRQCP LGKWAAEIKD PSKGVCVWLG TFNSAKEAAR AYDVEARRIY 180 GKKAKVNFPE EPTGYVDFAS IQPLVPAINF AAPVEAPIMD MYSDQGSNSF GCSDLGWEYE 240 TKSLDISSIS TIAEGAESAF VENNTYNSLV PPVMENNAAS SESWMRYLMD DDVDELIDGL 300 VNFYDHQDVV GNMDLWSFDD MPVFGDF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020192774.1 | 1e-160 | ethylene-responsive transcription factor 1-like | ||||
Swissprot | Q6K7E6 | 2e-94 | ERF1_ORYSJ; Ethylene-responsive transcription factor 1 | ||||
TrEMBL | T1NR78 | 0.0 | T1NR78_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_33298-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1039 | 38 | 134 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 6e-28 | ERF family protein |