PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_33275-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 194aa MW: 21132.7 Da PI: 9.7225 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 93.6 | 3.3e-29 | 18 | 145 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +pGfrF Pt++el+ +yL+++++g++ ++++vi+ vd+y+++P++L++ + ++ ++w+fF++r++++ +g + ++ +++ ++ TRIUR3_33275-P1 18 TPGFRFYPTEDELLGFYLRHRLAGTTrPHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGPPGPP---AVFSSSSSSS 108 69*********************9995666678**************84345322235669*********99988888774...3466666666 PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g+k+t+vfy+grap+g kt+W m+ey++ TRIUR3_33275-P1 109 AAAG-NSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 145 6666.899****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.16E-32 | 14 | 175 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 34.792 | 17 | 176 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.8E-18 | 19 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MMTTTSSGGA GGDLLVSTPG FRFYPTEDEL LGFYLRHRLA GTTRPHVDRV IPVVDVYSHH 60 PSHLRSMAGE ASVQDAEQWF FFCPRAEREL RGGPPGPPAV FSSSSSSSAA AGNSKVIGVK 120 RTMVFYQGRA PTGAKTTWKM NEYKAVAADD DTTTGHQTTA PLRLRNEFSV CRLYISTGTL 180 RSFDRRPLNT SGNG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-21 | 19 | 174 | 17 | 166 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020185458.1 | 1e-122 | NAC domain-containing protein 90-like isoform X1 | ||||
Swissprot | Q9FMR3 | 2e-55 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | T1NR58 | 1e-141 | T1NR58_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_33275-P1 | 1e-142 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1005 | 38 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 7e-52 | NAC domain containing protein 90 |
Publications ? help Back to Top | |||
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