PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32750-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 360aa    MW: 39972.7 Da    PI: 9.7629
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32750-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM576.6e-182069151
              NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51
                     lppGfrFhPtdeelv++yL+++++g ++++  +i+evd+yk++Pw+Lp++ 
  TRIUR3_32750-P1 20 LPPGFRFHPTDEELVMHYLCRRCAGLPISV-PIIAEVDLYKFDPWQLPSTS 69
                     79****************************.88**************9533 PP
2NAM384.9e-128812194128
              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +g    +kk Lvfy g+apkg kt+W+mheyrl
  TRIUR3_32750-P1  88 R-EGVPLAIKKALVFYAGKAPKGDKTNWIMHEYRL 121
                      3.778899*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-4016147IPR003441NAC domain
PROSITE profilePS5100524.51220147IPR003441NAC domain
PfamPF023651.4E-1521121IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MSGGGGGGSA ATQGQQDLQL PPGFRFHPTD EELVMHYLCR RCAGLPISVP IIAEVDLYKF  60
DPWQLPSTSS MPRRSMHACM PRNGAVRREG VPLAIKKALV FYAGKAPKGD KTNWIMHEYR  120
LADVDRSARK KNSLRLDDWV LCRIYNKKGA SERPGADAVA SATSLYLYIW CRRAALQHPT  180
PLSSGAQLHI PSTPRLGFLH GYGGEPAQVS ELGCRAQRCA AARRTSTAPR RTRSMAAREC  240
RETGAYQEVN HDLAKKVMNT PNSRHSGSIA SHDGTSGTLD LKSHMRSCGA RHAPIGPKQQ  300
KLRLRKVDDG NANLENIIFD QDVARKELPL MICVHEYPLS MVDHLGFRIF VQHDNQCLEW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-47131538174Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-101HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM7Z8460.0M7Z846_TRIUA; NAC domain-containing protein 48
STRINGTRIUR3_32750-P10.0(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.15e-65NAC family protein