PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32458-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 367aa    MW: 40139.5 Da    PI: 9.1995
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32458-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.62.1e-48141411128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lpp frFhPtdeel+ +yL++++++ ++++  +i +vdiyk++P+dLp ++  ++ +wyfFs+rd+ky++g r+nra+ sgyWkatg+dk++++
  TRIUR3_32458-P1  14 LPPEFRFHPTDEELILHYLRNRATAAPCPV-PIIVHVDIYKFDPRDLPFQAVYGDCQWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHE 106
                      6899**************************.88***************76667789*************************************9 PP

              NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +g+ vg+kk Lvfykgr pkg+kt W+mheyrl
  TRIUR3_32458-P1 107 AaTGQGVGVKKALVFYKGRPPKGTKTAWIMHEYRL 141
                      978888***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-5911171IPR003441NAC domain
PROSITE profilePS5100557.11814171IPR003441NAC domain
PfamPF023652.2E-2615141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MSMAQQGQGA ATLLPPEFRF HPTDEELILH YLRNRATAAP CPVPIIVHVD IYKFDPRDLP  60
FQAVYGDCQW YFFSPRDRKY PNGIRPNRAA GSGYWKATGT DKPIHEAATG QGVGVKKALV  120
FYKGRPPKGT KTAWIMHEYR LAAAVNTYKP IKFRNVSMRL DDWVLCRIYK KTALASPMVP  180
PLADYDHMAD HDALCGGGAF TDATCRPMIR QQHHQQPLAG RLPAFPSFSE LFDDYAFAQI  240
LDTDVEHGAT HHLAVHPSLK QLLPVGDSRH VVEPSYYAPS SSSSDASGGS AGKRKAASPG  300
EHATRQPSAK KLNGSCFDTP PQSANGWQAV ASVLSGLNHH MLPQFYAALH HPSSGSSAYP  360
GAALRAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-6611711168Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT7834500.0KT783450.1 Triticum aestivum NAC transcription factor 29 (NAC29) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160301.10.0NAC transcription factor NAM-B1-like
TrEMBLM8AC290.0M8AC29_TRIUA; NAC domain-containing protein 29
STRINGTRIUR3_32458-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123736123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-77NAC-like, activated by AP3/PI