PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32248-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 556aa    MW: 60219.3 Da    PI: 7.8989
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32248-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.11.6e-12200225126
          G2-like   1 kprlrWtpeLHerFveaveqLGGsek 26 
                      kprlrWt +LHerFv+av+qLGG+e 
  TRIUR3_32248-P1 200 KPRLRWTADLHERFVDAVAQLGGPES 225
                      79*********************986 PP
2G2-like47.44.3e-153133422655
          G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      +AtPktil++m+vkgLtl h+kSHLQkYR+
  TRIUR3_32248-P1 313 EATPKTILRTMGVKGLTLFHLKSHLQKYRM 342
                      7****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.9E-27197225IPR009057Homeodomain-like
SuperFamilySSF466894.66E-5312343IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-9313343IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.604.9E-27314343IPR009057Homeodomain-like
PfamPF143792.1E-19402447IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 556 aa     Download sequence    Send to blast
MAKGLASGCE PAYARVRVAG SEHGRQNKIA GIDRARRAAK YPTTGNRRHR DWWNGHPIHG  60
KVHVVPREQR ARLPIPLADV CLDAMWNAAG DGGLHKSPGE LERERGAEGN KPRLEKGRRR  120
EGGNRREKGE ELFVGSFAFG DEGGEGLCPS PPPPPFLAGE QQEEEMFPPG LIHHRADGPG  180
PSEVPRSGGA PSLVLTADPK PRLRWTADLH ERFVDAVAQL GGPESETLPP PPLPRFSPLS  240
GSSGMAIGGQ CVLAGWEFSF LVGATLIAWV LGVIANAAYP VKRSAFPLYP FPLNTDFLFL  300
SKDWDTSESV ISEATPKTIL RTMGVKGLTL FHLKSHLQKY RMGKQTGKET PEQSKDVWTR  360
FIVCYKEPLS ANFLKGSYLL DAQGGMSLSP RVSTQDAKES QEVKEALRAQ MEMQRSLHEQ  420
VEVQKHVDIR MDAYTTYINT LLEKACKIVS EQFASSGFSV SDQSLPELSS GGVMCGTATD  480
ALSSSVFHQL SVSSINMHSP GGKPSPSGME GQLLLQSKLD GRKSMTDAAL TTMLGAPDPS  540
HGGGARAVDL HLEAQA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3636650.0AK363665.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2017P09.
GenBankAK3673540.0AK367354.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2055J10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195362.11e-117protein PHR1-LIKE 3-like isoform X1
TrEMBLM7ZVH20.0M7ZVH2_TRIUA; Myb family transcription factor APL
STRINGTRIUR3_32248-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34273873
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.12e-38G2-like family protein