PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_31683-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 214aa MW: 22697.7 Da PI: 11.9348 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 48.7 | 1.5e-15 | 81 | 121 | 2 | 47 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv 47 D ++WrKYGqK++kgs+fp +s+gCp++k+vers+ dp++ TRIUR3_31683-P1 81 TDSWAWRKYGQKPIKGSPFPS-----SSKGCPARKQVERSQADPDT 121 69******************7.....589**************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 17.282 | 75 | 135 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.1E-14 | 77 | 121 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.07E-12 | 78 | 122 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.7E-13 | 80 | 126 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.9E-10 | 82 | 120 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MGRPSNSRFR VATDGAVSGG EQKASGDGVS ADRNSPGSPS PPAVPSTSGR RRSLQKRVVT 60 VPLADLNVPR PKGVGEGNTP TDSWAWRKYG QKPIKGSPFP SSSKGCPARK QVERSQADPD 120 TASCWELQRD GEGGPSGQDH LHHLRRDVTV VSPVALGGLT SIRPRSGREG RRVLVVGLAT 180 FITTIVTTPA GRPRVCHTRG LALVGRIHPR VARV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | DQ323512 | 1e-129 | DQ323512.1 Triticum aestivum WRKY28 mRNA, partial cds. | |||
GenBank | EU669659 | 1e-129 | EU669659.1 Triticum aestivum WRKY28 gene, partial cds. | |||
GenBank | HG670306 | 1e-129 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020149507.1 | 1e-64 | probable WRKY transcription factor 65 | ||||
TrEMBL | M8A442 | 1e-149 | M8A442_TRIUA; Putative WRKY transcription factor 69 | ||||
STRING | TRIUR3_31683-P1 | 1e-150 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP10947 | 33 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 6e-25 | WRKY DNA-binding protein 69 |