PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_29784-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 293aa    MW: 32028.1 Da    PI: 4.9129
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_29784-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.9e-15155200452
              AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                       GVr+++ +g+++AeIrd +    +  r++lg+f+t+e Aa  +++a+  
  TRIUR3_29784-P1 155 IGVRRRP-WGKYAAEIRDSTR---SgERVWLGTFDTPEAAALTYDQAAYT 200
                      6******.**********322...35*********************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.929153211IPR001471AP2/ERF domain
PRINTSPR003675.3E-7154165IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-20154213IPR016177DNA-binding domain
PfamPF008473.6E-10155200IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-26156212IPR001471AP2/ERF domain
CDDcd000187.06E-22156212No hitNo description
SMARTSM003804.8E-27156217IPR001471AP2/ERF domain
PRINTSPR003675.3E-7177193IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0009873Biological Processethylene-activated signaling pathway
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MEPNHNGYGY YDHNNGSYTN DDNPCYYGMS YASSEPSSYG YQYQQSPSTQ PQSSYDNHYY  60
AAYDITNSSS SSAAPSYAAA DDIALYAQQQ HPQYLNFGGG SYQYDGAASA MGMGMGMDMD  120
QFSALMEATS ISTAGPSWAE QQEAKKAKAE PPQLIGVRRR PWGKYAAEIR DSTRSGERVW  180
LGTFDTPEAA ALTYDQAAYT SRGPAAVLNF PVERVRESLR VLKLGKAAAA GEDDSPVLAL  240
KRRHCMRKRT PKGKGQEGDV KKKKQPAADT ASSVLELEDL GADYLEELLA LSE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-26142213374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1246263RKRTPKGKGQEGDVKKKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00374DAPTransfer from AT3G23240Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1306024e-33AC130602.5 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone B1122D01, complete sequence.
GenBankAP0149614e-33AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196844.11e-166ethylene-responsive transcription factor 15-like
TrEMBLT1NGN20.0T1NGN2_TRIUA; Uncharacterized protein
STRINGTRIUR3_29784-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-42ethylene response factor 1