PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_29751-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 208aa    MW: 23004.7 Da    PI: 6.799
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_29751-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.1e-10112146539
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                      kr +r   NR +A+rsR RK+++i eLe+ v  L+
  TRIUR3_29751-P1 112 KRVKRILANRQSAQRSRVRKLQYISELERSVTGLQ 146
                      8999*************************998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0048108170IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.8E-10112153No hitNo description
SuperFamilySSF579594.34E-9112154No hitNo description
PfamPF001701.5E-8112147IPR004827Basic-leucine zipper domain
CDDcd147032.15E-18113163No hitNo description
PROSITE patternPS000360115130IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MAQLPPRAPS AGEQDWPVAG EFLGFAAARR GVHRRSASDP AAFLEAVPMD HILSGGGGDD  60
EFDRLDDEQL MSMFSNVDGG CDRSGFMDTG EAEEGAASAG AMAAADGFGD PKRVKRILAN  120
RQSAQRSRVR KLQYISELER SVTGLQGSTI WLQQPERRKN REKGEQSSRE ALRQYPHHHR  180
RHAFVLMELS LGLNWIKSSR DVIELNVC
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0962472e-31FP096247.1 Phyllostachys edulis cDNA clone: bphyst038a13, full insert sequence.
GenBankFP0974722e-31FP097472.1 Phyllostachys edulis cDNA clone: bphylf047m15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020168576.17e-98basic leucine zipper 19-like
SwissprotQ5JMK61e-34BZP06_ORYSJ; Basic leucine zipper 6
TrEMBLM7ZD241e-151M7ZD24_TRIUA; Transcription factor RF2b
STRINGTRIUR3_29751-P11e-151(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.27e-17bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]