PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_29175-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 424aa    MW: 47160.6 Da    PI: 4.3514
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_29175-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57342.22.3e-13238327297
           DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                      +f+r+ws +De+ +L +l   +++ g  p    da+ + + ++++ ++  +++l  K+  LK++++  +k+        +skehd+++++lsk 
  TRIUR3_29175-P1 238 AFSRIWSTDDEVRILEALAVHQKQPG--PLPQSDALLDALAGKLDNRAyGRKELKVKVGTLKRRYHALSKR-----GELLSKEHDRQVLDLSKT 324
                      699******************99999..8888999*********987526899*****************9.....45699************* PP

           DUF573  95 iWg 97 
                      +Wg
  TRIUR3_29175-P1 325 VWG 327
                      **8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.8E-18239327IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MSPKRSAKMA APPTPHPPPP PPASSEETGS RSSSEESEDA IADSPPSANT RAPPQKGEED  60
DESEQDESDD EEEEPVHAAL TPKYQPPPQQ QREGSESSDD EEEEEEEEPA LAAPPYSPKK  120
RPTPQQIEEE DESEEEEEEE EPAHAAPTAA PTTKYQPPPQ QQKEGSESSD DEEEEEEEEE  180
PTQSAPPSAP TKRPPPQQID EEEEEGESEE EKPPKLAPKQ LPEGVKTTAV AETKKPAAFS  240
RIWSTDDEVR ILEALAVHQK QPGPLPQSDA LLDALAGKLD NRAYGRKELK VKVGTLKRRY  300
HALSKRGELL SKEHDRQVLD LSKTVWGGDK STAAAASVKT TASGHKRKSF EEMCELYPYL  360
AEDVKELMVE NPGMFKSDFG KMDHEKARVM NEKIKRQRVA QMKLGLRRHD LIREVTKTII  420
DLVD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1392397KIKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181583.11e-152ABC transporter F family member 4-like
TrEMBLM7YKG90.0M7YKG9_TRIUA; Uncharacterized protein
STRINGTRIUR3_29175-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67292737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-08DNA-binding storekeeper protein-related transcriptional regulator