PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_29014-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 359aa    MW: 39253.5 Da    PI: 10.3585
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_29014-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.22.5e-37701922103
              TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssasec 73 
                      ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa  + t t                      s       
  TRIUR3_29014-P1  70 PPKRTTSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPASPASTTTssssplllsfhsgsvgldvspsS------- 156
                      789*************************************************************44444444444444444222210....... PP

              TCP  74 eaesssssasnsssg.............kaaksaakskksqks 103
                             ++++ + +             ++++ +++++++q++
  TRIUR3_29014-P1 157 -------ATAAANTElsrkrrweqemqqQQQQHHHHQQQQQQQ 192
                      .......111111112212122222211111111111111111 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.1E-3174197IPR005333Transcription factor, TCP
PROSITE profilePS5136925.6776130IPR017887Transcription factor TCP subgroup
Gene3DG3DSA:1.10.30.101.6E-4166208IPR009071High mobility group box domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MGAAAAATTA VPTSPNQLSK TPQEQLGRRP NFPLQLLEKK EEHPCSISPA AGLGTNGSAT  60
GELQVRKAAP PKRTTSKDRH TKVDGRGRRI RMPAICAARV FQLTRELGHK TDGETIEWLL  120
QQAEPASPAS TTTSSSSPLL LSFHSGSVGL DVSPSSATAA ANTELSRKRR WEQEMQQQQQ  180
QHHHHQQQQQ QQYQQQMAGY TQSQMPGTVW MVPTRKPQAA RAGAAGKVVA AAANLSGWWV  240
RWRRLMPSTG VDGKCYRLLS YSVATSGLLS PLVLICLLSG GQGPLPPKCL GGKGIPQRPF  300
EREHKDAPIL TKGGLRLQRG QEDELKALRE ESAKHALELE RLEKELQGEK AETSRLQEE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3696151e-149AK369615.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2094G23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020168709.11e-63transcription factor TCP15-like
TrEMBLM7ZJ940.0M7ZJ94_TRIUA; Uncharacterized protein
STRINGTRIUR3_29014-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.14e-34TCP family protein