PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28514-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 398aa    MW: 43182.5 Da    PI: 8.3601
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28514-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86e-3089145259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa  +++++i+Y+g+Hnh+
  TRIUR3_28514-P1  89 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 145
                      8****************************************.9**************8 PP
2WRKY33.67.9e-11255275121
                      ---SS-EEEEEEE--TT-SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                      ldDgy+WrKYGqK+vkg+++p
  TRIUR3_28514-P1 255 LDDGYRWRKYGQKVVKGNPHP 275
                      59*****************99 PP
3WRKY59.56.3e-192963401559
                      -TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  15 vkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      vkg  + rsYY+Ct++gC vkk++er+++dp++v++tYeg+H h+
  TRIUR3_28514-P1 296 VKGRGVGRSYYKCTYQGCDVKKHIERCSQDPTAVITTYEGKHSHD 340
                      9999****************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-2780147IPR003657WRKY domain
SuperFamilySSF1182906.54E-2486147IPR003657WRKY domain
SMARTSM007743.5E-3088146IPR003657WRKY domain
PfamPF031068.7E-2389145IPR003657WRKY domain
PROSITE profilePS5081122.81489147IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-34242342IPR003657WRKY domain
SuperFamilySSF1182902.62E-9247276IPR003657WRKY domain
PROSITE profilePS5081128.461250342IPR003657WRKY domain
SMARTSM007741.6E-31255341IPR003657WRKY domain
PfamPF031068.9E-7256275IPR003657WRKY domain
PfamPF031066.7E-13296340IPR003657WRKY domain
SuperFamilySSF1182903.79E-15296342IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MSHQQALAQV TAQAVHSQYT VGSQADYSLP FSSATTSALT SQFINSSANV TSMKETATLP  60
LHTVNDNLKS NEVSQGFQTS ALTVDKPADD GYNWRKYGQK AVKGGEYPRS YYKCTQASCP  120
VKKKVEHSAY GQITQIIYRG QHNHQRPPKR RSKDGGNLLN EDDFPENRDA LTRSEPGSQD  180
HSGKVEVSND GITGPSVSKR RGGGDQSSGS SDTEEDNDEA GDDNGDAGIV NANKRHVPAP  240
AQRIIVQTTS EIDLLDDGYR WRKYGQKVVK GNPHPSFHPG HLDLSHLHTP CVILVVKGRG  300
VGRSYYKCTY QGCDVKKHIE RCSQDPTAVI TTYEGKHSHD VPAARSSVAA AASANASSSI  360
SLLHRGQKAA SSSQRVLPRA ALHTSDSSLQ LKEENEIT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A8e-3274343578Probable WRKY transcription factor 4
2lex_A8e-3274343578Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145150RPPKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8273950.0KR827395.1 Triticum aestivum WRKY44 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193919.10.0probable WRKY transcription factor 4
RefseqXP_020193920.10.0probable WRKY transcription factor 4
TrEMBLA0A446QYL40.0A0A446QYL4_TRITD; Uncharacterized protein
TrEMBLM7ZTD70.0M7ZTD7_TRIUA; Putative WRKY transcription factor 4
STRINGTRIUR3_28514-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134538122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-67WRKY DNA-binding protein 3