PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_27883-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 223aa    MW: 25170 Da    PI: 10.2668
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_27883-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.13.4e-11181221350
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                       +GV++  k+ +W A I++      +k+++lg+ gt +eAa++++++ 
  TRIUR3_27883-P1 181 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRYY 221
                      79**98..47*********4.....5*******************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.702156223IPR001471AP2/ERF domain
PfamPF008475.3E-5180220IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-6180221IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.5E-4183219IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MIGRLPAFTL ADRPSAYLAF IGMSPRSLLG RSAFNPALCL PRLFKPAAHG PKPYPFEPFS  60
HRPTTHPSSP WPGPLLCGGS SSMVSLRRRR LLGLCSGKDS LPVDLPKPVE NEKHGEVEHA  120
NVNPLSVHPL PLTRTSDVLP ESSNGSDSLK EEKNQYYPGK EIKRRKRHRR KQYVDQEPCI  180
MRGVYFKNMK WQAAIKVDKK QIHLGTVGTQ DEAARLYDRY YLD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2501020.0AK250102.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf64c22, mRNA sequence.
GenBankAK3645620.0AK364562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2026I07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197934.16e-97ethylene-responsive transcription factor-like protein At4g13040
TrEMBLT1NBI51e-164T1NBI5_TRIUA; Uncharacterized protein
STRINGTRIUR3_27883-P11e-165(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.26e-23ERF family protein