PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_27406-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 347aa    MW: 36978.9 Da    PI: 9.6486
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_27406-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.26.4e-11153197255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g  +A    p    k+ +r++lg f+tae+Aa a+++a+++++g
  TRIUR3_27406-P1 153 HYRGVRQRP-WGN-RA----P----KKaARVWLGPFDTAEDAAIAYDEAALRFKG 197
                      79*******.666.34....4....256***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.4E-22152206IPR001471AP2/ERF domain
CDDcd000181.93E-21153206No hitNo description
PROSITE profilePS5103217.411153205IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-14153206IPR016177DNA-binding domain
SMARTSM003803.0E-24153211IPR001471AP2/ERF domain
PfamPF008479.7E-7153197IPR001471AP2/ERF domain
PRINTSPR003671.6E-11154165IPR001471AP2/ERF domain
PRINTSPR003671.6E-11187207IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MATRWRRRRI GARTSTGSSR HGKRPLPADE EEEQPPPPPS AAKHEQVEEQ PYHPLIAHAL  60
QQQGAASAGG SSGADVADPS PSPEAYAQYY YSARADHDAT AMVSALSHVI RATPEQQQAY  120
YPAGSAAVSG EQQHQHDAAA AAAIAEEQGR KRHYRGVRQR PWGNRAPKKA ARVWLGPFDT  180
AEDAAIAYDE AALRFKGTKA KLNFPERVQG RTDLGFVVTR GIPDRLQQQQ HYPATVGAPA  240
MRPPPHQTVV PYPDLMRYAQ LLQGAGSAGG AVNLPFGAMS PPSMSSSSPH ILDFSTQQLI  300
RVSPASPAAA ISSSGTTGPS TSSSTTTASS PGAAWPYTGE HKNNKDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-19152209467ATERF1
3gcc_A2e-19152209467ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3682540.0AK368254.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2070P06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191321.11e-135ethylene-responsive transcription factor ERF113-like
TrEMBLT1NA800.0T1NA80_TRIUA; Uncharacterized protein
STRINGTRIUR3_27406-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44473571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.19e-25related to AP2 6l