PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_27358-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 427aa    MW: 47880.2 Da    PI: 4.7864
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_27358-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.83.8e-1668117352
          G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQk 52 
                      r  W++eLHe+F++ave LG +  At ++i + m+ k+  Lt++hv+SHLQ+
  TRIUR3_27358-P1  68 RFIWSSELHEKFLQAVEVLG-A-SATARKIHQYMNAKDlnLTIQHVASHLQM 117
                      789****************4.4.5999*********973369*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.88E-967117IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-1368117IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.4E-1468117IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MCAYDEAVSA RMTLGTCFNV VKPLDTETVN FLRMRALQHR SIKNHRSVTE DEEQDALNAN  60
VYPYNLGRFI WSSELHEKFL QAVEVLGASA TARKIHQYMN AKDLNLTIQH VASHLQMSPF  120
TNYSEWAEGK KHEGITEMIS SAYKAASTKP NNHPATTQTQ FTHGVASAIW DKYPGMVWPH  180
VEGSSAASAM WYNYPGKPWR QVGKSSAGAR VSQTNARPPP VLIHGTKSIW DRYEESLQYY  240
NESLSHKREV LPVKSKALAG YGRKIFINLE REETSRTEAS GKIVINLESH DTQKDTTDDV  300
HAAVTPQEDA MDEVHAAVTL QKDTMNEVHA AVTLQEDNYQ PAAENVQSEP FSDWEEVEKF  360
WMNQMGGQGQ EEQVLEPMDL LQIDGIDPEE LLQEDETWNQ ALQPANPVNV VDNVPMAEEP  420
AAGNAPA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157240.10.0uncharacterized protein LOC109742553
TrEMBLM8A8W40.0M8A8W4_TRIUA; Uncharacterized protein
STRINGTRIUR3_27358-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.11e-08G2-like family protein