PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_25968-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 651aa    MW: 71314.7 Da    PI: 6.1034
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_25968-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like45.41.8e-142342632655
          G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      +A+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIUR3_25968-P1 234 EAVPKRILELMNVEKLTRENVASHLQKYRL 263
                      79***************************8 PP
2Response_reg78.42.5e-26251331109
                      EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS
     Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 
                      vl vdD+p+ +++l+++l++ +y +v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge + +l+ +  
  TRIUR3_25968-P1  25 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVLKGITH 116
                      799********************.***************99999********************87754.558********************* PP

                      TESEEEESS--HHHHHH CS
     Response_reg  93 GakdflsKpfdpeelvk 109
                      Ga d+l Kp+ +eel++
  TRIUR3_25968-P1 117 GACDYLLKPVRIEELRN 133
                      ***************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23005.6E-4122157No hitNo description
SuperFamilySSF521726.26E-3522149IPR011006CheY-like superfamily
SMARTSM004485.6E-3123135IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011041.85824139IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.7E-2325133IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.77E-2626138No hitNo description
Gene3DG3DSA:1.10.10.601.9E-14233268IPR009057Homeodomain-like
SuperFamilySSF466892.15E-7233267IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-13234263IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0009736Biological Processcytokinin-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MMMEARKGMM ERERERDQFP VGMRVLAVDD DPVCLKVLEV LLRRCQYHVT TTNQAATALR  60
LLRENKDMFD LVISDVHMPD MDGFKLLELV GLEMDLPVIM LSVNGETKSV LKGITHGACD  120
YLLKPVRIEE LRNVWQHVVR RKFSNREPNS NLDLCKEISK PPSADSYHRL GQATCDSHRS  180
CDPSNRAGKK RKEPHSEEED EGEDNDDAAG SKRPRVATAY PFMLVSFLLL LFAEAVPKRI  240
LELMNVEKLT RENVASHLQK YRLYLRRLSA VASQQASIAA AFGGRDPFLH MGAFEGLHSY  300
HQPFAPSAAL PSFNPHGLLS SAGAAAFGLQ DLASPKANQC SSSNGAVSHC AGDTDKFHIV  360
SLQDNQQADL SQGLTSSSLG QPQLQQKWIH QETNDLCSVF SGGALANTMS GTLQRVTSSS  420
LPPEDLLECT THIKVGAHPS IGIPTASSGL LERSVGVSAD FRDSCISQRC ALPISDGFSV  480
DKLPLHIPFD RVGATKLDAS FVAGEHEMDQ KGIFSERMGV SVCPSESLIV ASNAKCRASS  540
SGSTILPLPH DTERHSKYLE FGAASNSRHR MDGMRQDHRL NNDGFSYDGG AIVPEQTDMY  600
DLGVPKLQGG FNSSSCNFDG LLNSIIKVEN DEVPFNENDL GCELFPLGAC I
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins (By similarity). Functions as a response regulator in response to cytokinins (PubMed:22383541). {ECO:0000250|UniProtKB:Q940D0, ECO:0000269|PubMed:22383541}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3699660.0AK369966.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2102E11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190045.10.0two-component response regulator ORR22-like
SwissprotB8B3I40.0ORR22_ORYSI; Two-component response regulator ORR22
SwissprotQ5SML50.0ORR22_ORYSJ; Two-component response regulator ORR22
TrEMBLM7Y7Z30.0M7Y7Z3_TRIUA; Two-component response regulator
STRINGTRIUR3_25968-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18563894
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-87response regulator 12
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]